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Cluster: Rep_2402_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2402_c_46 Rep_2402_c_46_151 138244 139782 - 2.A.66.1.40
pfam Rep_2402_c_46 Rep_2402_c_46_152 139798 140889 - PS_pyruv_trans
CAZyme Rep_2402_c_46 Rep_2402_c_46_153 140902 142065 - GT4
pfam Rep_2402_c_46 Rep_2402_c_46_154 142099 143013 - Glycos_transf_2
CAZyme Rep_2402_c_46 Rep_2402_c_46_155 143010 143909 - GT2
CAZyme Rep_2402_c_46 Rep_2402_c_46_156 143934 144935 - GT2
pfam Rep_2402_c_46 Rep_2402_c_46_157 144939 146018 - EpsG
CAZyme Rep_2402_c_46 Rep_2402_c_46_158 146066 147193 - GT4
pfam Rep_2402_c_46 Rep_2402_c_46_159 147190 147846 - PglD_N
TC Rep_2402_c_46 Rep_2402_c_46_160 147843 148484 - 9.B.18.1.2
Gene ID: Rep_2402_c_46_151
Type: TC
Location: 138244 - 139782 (-)
Gene ID: Rep_2402_c_46_152
Type: pfam
Location: 139798 - 140889 (-)
Gene ID: Rep_2402_c_46_153
Type: CAZyme
Location: 140902 - 142065 (-)
Gene ID: Rep_2402_c_46_154
Type: pfam
Location: 142099 - 143013 (-)
Gene ID: Rep_2402_c_46_155
Type: CAZyme
Location: 143010 - 143909 (-)
Gene ID: Rep_2402_c_46_156
Type: CAZyme
Location: 143934 - 144935 (-)
Gene ID: Rep_2402_c_46_157
Type: pfam
Location: 144939 - 146018 (-)
Gene ID: Rep_2402_c_46_158
Type: CAZyme
Location: 146066 - 147193 (-)
Gene ID: Rep_2402_c_46_159
Type: pfam
Location: 147190 - 147846 (-)
Gene ID: Rep_2402_c_46_160
Type: TC
Location: 147843 - 148484 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
RUG11237
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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