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Genome Details

Selected Rep_genome_ID: Rep_165
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900770395
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG137_bin.64 3,421,179 98.89% 0.99% NA Africa H3AfricaPhase2
FerrettiP_2018_SRR5274022_bin.33 3,718,360 98.88% 0.74% Italy Europe ELGG
Rep_165 3,510,035 97.7778% 0.185185% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_165_CGC5 CGCFAM_00001 Yes 6 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_165_CGC16 CGCFAM_00007 Yes 5 2
Rep_165_CGC9 CGCFAM_00044 Yes 6 2 beta-mannan/xylan/beta-glucan
Rep_165_CGC4 CGCFAM_00062 Yes 16 7 beta-glucan
Rep_165_CGC20 CGCFAM_00081 Yes 12 1
Rep_165_CGC17 CGCFAM_00095 Yes 8 3
Rep_165_CGC39 CGCFAM_00310 Yes 8 4
Rep_165_CGC36 CGCFAM_00897 Yes 6 2
Rep_165_CGC13 CGCFAM_01035 Yes 3 1
Rep_165_CGC41 CGCFAM_02281 Yes 14 6
Rep_165_CGC26 CGCFAM_02298 Yes 7 5
Rep_165_CGC31 CGCFAM_02500 Yes 10 2
Rep_165_CGC23 CGCFAM_03968 Yes 11 9
Rep_165_CGC33 CGCFAM_04641 Yes 6 2
Rep_165_CGC10 CGCFAM_05518 Yes 9 3
Rep_165_CGC14 CGCFAM_05684 Yes 5 3
Rep_165_CGC44 CGCFAM_05714 Yes 8 3
Rep_165_CGC1 CGCFAM_05760 Yes 3 1
Rep_165_CGC7 CGCFAM_07059 Yes 18 7
Rep_165_CGC19 CGCFAM_08682 Yes 3 1
Rep_165_CGC6 CGCFAM_09638 Yes 4 2
Rep_165_CGC34 CGCFAM_09684 Yes 8 1
Rep_165_CGC48 CGCFAM_09685 Yes 4 1
Rep_165_CGC22 CGCFAM_11185 Yes 4 1
Rep_165_CGC18 CGCFAM_11213 Yes 7 1
Top CAZyme Families