Cluster: Rep_165_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: beta-mannan/xylan/beta-glucan
- Genome ID: Rep_165
- CGC Family ID: CGCFAM_00044
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_165_c_0 | Rep_165_c_0_418 | 532501 | 534225 | + | GH35 |
| TF | Rep_165_c_0 | Rep_165_c_0_419 | 534266 | 538120 | + | HTH_AraC | HTH_AraC |
| TC | Rep_165_c_0 | Rep_165_c_0_420 | 538317 | 541490 | + | 1.B.14.6.1 |
| pfam | Rep_165_c_0 | Rep_165_c_0_421 | 541535 | 543277 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_165_c_0 | Rep_165_c_0_422 | 543317 | 544687 | + | SGBP_B_XBD |
| CAZyme | Rep_165_c_0 | Rep_165_c_0_423 | 544720 | 547095 | + | GH10 |
Gene ID: Rep_165_c_0_418
Type: CAZyme
Location: 532501 - 534225 (+)
Type: CAZyme
Location: 532501 - 534225 (+)
Gene ID: Rep_165_c_0_419
Type: TF
Location: 534266 - 538120 (+)
Type: TF
Location: 534266 - 538120 (+)
Gene ID: Rep_165_c_0_420
Type: TC
Location: 538317 - 541490 (+)
Type: TC
Location: 538317 - 541490 (+)
Gene ID: Rep_165_c_0_421
Type: pfam
Location: 541535 - 543277 (+)
Type: pfam
Location: 541535 - 543277 (+)
Gene ID: Rep_165_c_0_422
Type: pfam
Location: 543317 - 544687 (+)
Type: pfam
Location: 543317 - 544687 (+)
Gene ID: Rep_165_c_0_423
Type: CAZyme
Location: 544720 - 547095 (+)
Type: CAZyme
Location: 544720 - 547095 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900770395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.