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Cluster: Rep_165_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_165_c_8 Rep_165_c_8_49 66230 66607 - 9.B.55.1.2
peptidase Rep_165_c_8 Rep_165_c_8_50 66781 69987 - S41.UPB
pfam Rep_165_c_8 Rep_165_c_8_51 70064 70351 - DUF4491
TC Rep_165_c_8 Rep_165_c_8_52 70367 71689 - 2.A.66.1.28
pfam Rep_165_c_8 Rep_165_c_8_53 71683 73275 - Endonuclease_NS | UPF0014
pfam Rep_165_c_8 Rep_165_c_8_54 73286 73972 - ABC_tran
CAZyme Rep_165_c_8 Rep_165_c_8_55 74057 76369 - GH31_3
TC Rep_165_c_8 Rep_165_c_8_56 76424 78628 - 3.A.10.1.11
NULL(UNKNOWN) Rep_165_c_8 Rep_165_c_8_57 78753 78899 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_165_c_8 Rep_165_c_8_58 79246 81729 - GH94
Gene ID: Rep_165_c_8_49
Type: TC
Location: 66230 - 66607 (-)
Gene ID: Rep_165_c_8_50
Type: peptidase
Location: 66781 - 69987 (-)
Gene ID: Rep_165_c_8_51
Type: pfam
Location: 70064 - 70351 (-)
Gene ID: Rep_165_c_8_52
Type: TC
Location: 70367 - 71689 (-)
Gene ID: Rep_165_c_8_53
Type: pfam
Location: 71683 - 73275 (-)
Gene ID: Rep_165_c_8_54
Type: pfam
Location: 73286 - 73972 (-)
Gene ID: Rep_165_c_8_55
Type: CAZyme
Location: 74057 - 76369 (-)
Gene ID: Rep_165_c_8_56
Type: TC
Location: 76424 - 78628 (-)
Gene ID: Rep_165_c_8_57
Type:
Location: 78753 - 78899 (+)
Gene ID: Rep_165_c_8_58
Type: CAZyme
Location: 79246 - 81729 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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