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Cluster: Rep_165_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_165_c_0 Rep_165_c_0_442 565635 567614 + 2.A.67.4.2
NULL(UNKNOWN) Rep_165_c_0 Rep_165_c_0_443 567623 569554 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_165_c_0 Rep_165_c_0_444 569536 570288 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_165_c_0 Rep_165_c_0_445 570385 571380 + 2.A.28.2.4
pfam Rep_165_c_0 Rep_165_c_0_446 571494 572012 + Ferritin
CAZyme Rep_165_c_0 Rep_165_c_0_447 572489 573409 + GT8
NULL(UNKNOWN) Rep_165_c_0 Rep_165_c_0_448 573413 574525 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_165_c_0 Rep_165_c_0_449 574576 575661 - GT4
CAZyme Rep_165_c_0 Rep_165_c_0_450 575683 576714 - GT2
Gene ID: Rep_165_c_0_442
Type: TC
Location: 565635 - 567614 (+)
Gene ID: Rep_165_c_0_443
Type:
Location: 567623 - 569554 (+)
Gene ID: Rep_165_c_0_444
Type:
Location: 569536 - 570288 (+)
Gene ID: Rep_165_c_0_445
Type: TC
Location: 570385 - 571380 (+)
Gene ID: Rep_165_c_0_446
Type: pfam
Location: 571494 - 572012 (+)
Gene ID: Rep_165_c_0_447
Type: CAZyme
Location: 572489 - 573409 (+)
Gene ID: Rep_165_c_0_448
Type:
Location: 573413 - 574525 (+)
Gene ID: Rep_165_c_0_449
Type: CAZyme
Location: 574576 - 575661 (-)
Gene ID: Rep_165_c_0_450
Type: CAZyme
Location: 575683 - 576714 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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