Cluster: Rep_165_CGC41
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_165
- CGC Family ID: CGCFAM_02281
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_165_c_15 | Rep_165_c_15_31 | 40120 | 41373 | + | GH5_7 |
| CAZyme | Rep_165_c_15 | Rep_165_c_15_32 | 41420 | 42742 | + | CE7 |
| CAZyme | Rep_165_c_15 | Rep_165_c_15_33 | 42758 | 43840 | + | GH26 |
| CAZyme | Rep_165_c_15 | Rep_165_c_15_34 | 43864 | 45027 | + | GH130_1 |
| TC | Rep_165_c_15 | Rep_165_c_15_35 | 45063 | 46406 | + | 2.A.2.3.4 |
| pfam | Rep_165_c_15 | Rep_165_c_15_36 | 46456 | 47625 | + | GlcNAc_2-epim |
| TF | Rep_165_c_15 | Rep_165_c_15_37 | 47652 | 48548 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_165_c_15 | Rep_165_c_15_38 | 48555 | 49745 | + | GH5_4 |
| TF | Rep_165_c_15 | Rep_165_c_15_39 | 49875 | 51296 | + | 0040266 |
| NULL(UNKNOWN) | Rep_165_c_15 | Rep_165_c_15_40 | 51545 | 52489 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_165_c_15 | Rep_165_c_15_41 | 52607 | 55810 | + | 1.B.14.6.1 |
| pfam | Rep_165_c_15 | Rep_165_c_15_42 | 55855 | 57627 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_165_c_15 | Rep_165_c_15_43 | 57647 | 59278 | + | TIG |
| CAZyme | Rep_165_c_15 | Rep_165_c_15_44 | 59294 | 60790 | + | GH5_4 |
Gene ID: Rep_165_c_15_31
Type: CAZyme
Location: 40120 - 41373 (+)
Type: CAZyme
Location: 40120 - 41373 (+)
Gene ID: Rep_165_c_15_32
Type: CAZyme
Location: 41420 - 42742 (+)
Type: CAZyme
Location: 41420 - 42742 (+)
Gene ID: Rep_165_c_15_33
Type: CAZyme
Location: 42758 - 43840 (+)
Type: CAZyme
Location: 42758 - 43840 (+)
Gene ID: Rep_165_c_15_34
Type: CAZyme
Location: 43864 - 45027 (+)
Type: CAZyme
Location: 43864 - 45027 (+)
Gene ID: Rep_165_c_15_35
Type: TC
Location: 45063 - 46406 (+)
Type: TC
Location: 45063 - 46406 (+)
Gene ID: Rep_165_c_15_36
Type: pfam
Location: 46456 - 47625 (+)
Type: pfam
Location: 46456 - 47625 (+)
Gene ID: Rep_165_c_15_37
Type: TF
Location: 47652 - 48548 (+)
Type: TF
Location: 47652 - 48548 (+)
Gene ID: Rep_165_c_15_38
Type: CAZyme
Location: 48555 - 49745 (+)
Type: CAZyme
Location: 48555 - 49745 (+)
Gene ID: Rep_165_c_15_39
Type: TF
Location: 49875 - 51296 (+)
Type: TF
Location: 49875 - 51296 (+)
Gene ID: Rep_165_c_15_40
Type:
Location: 51545 - 52489 (+)
Type:
Location: 51545 - 52489 (+)
Gene ID: Rep_165_c_15_41
Type: TC
Location: 52607 - 55810 (+)
Type: TC
Location: 52607 - 55810 (+)
Gene ID: Rep_165_c_15_42
Type: pfam
Location: 55855 - 57627 (+)
Type: pfam
Location: 55855 - 57627 (+)
Gene ID: Rep_165_c_15_43
Type: pfam
Location: 57647 - 59278 (+)
Type: pfam
Location: 57647 - 59278 (+)
Gene ID: Rep_165_c_15_44
Type: CAZyme
Location: 59294 - 60790 (+)
Type: CAZyme
Location: 59294 - 60790 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900770395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.