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Cluster: Rep_165_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_165_c_5 Rep_165_c_5_10 16589 19759 + 1.B.14.6.1
TC Rep_165_c_5 Rep_165_c_5_11 19812 21809 + 8.A.46.1.1
CAZyme Rep_165_c_5 Rep_165_c_5_12 21837 22949 + GH43_24
CAZyme Rep_165_c_5 Rep_165_c_5_13 23140 25455 + GH105 | GH154
CAZyme Rep_165_c_5 Rep_165_c_5_14 25479 26561 + GH43_19
CAZyme Rep_165_c_5 Rep_165_c_5_15 26558 28585 + GH127
CAZyme Rep_165_c_5 Rep_165_c_5_16 28638 31196 + GH115
CAZyme Rep_165_c_5 Rep_165_c_5_17 31268 33181 + GH43_19 | GH43_29
CAZyme Rep_165_c_5 Rep_165_c_5_18 33217 35091 + PL33_1
CAZyme Rep_165_c_5 Rep_165_c_5_19 35138 37090 + GH97
CAZyme Rep_165_c_5 Rep_165_c_5_20 37184 39517 + GH35
Gene ID: Rep_165_c_5_10
Type: TC
Location: 16589 - 19759 (+)
Gene ID: Rep_165_c_5_11
Type: TC
Location: 19812 - 21809 (+)
Gene ID: Rep_165_c_5_12
Type: CAZyme
Location: 21837 - 22949 (+)
Gene ID: Rep_165_c_5_13
Type: CAZyme
Location: 23140 - 25455 (+)
Gene ID: Rep_165_c_5_14
Type: CAZyme
Location: 25479 - 26561 (+)
Gene ID: Rep_165_c_5_15
Type: CAZyme
Location: 26558 - 28585 (+)
Gene ID: Rep_165_c_5_16
Type: CAZyme
Location: 28638 - 31196 (+)
Gene ID: Rep_165_c_5_17
Type: CAZyme
Location: 31268 - 33181 (+)
Gene ID: Rep_165_c_5_18
Type: CAZyme
Location: 33217 - 35091 (+)
Gene ID: Rep_165_c_5_19
Type: CAZyme
Location: 35138 - 37090 (+)
Gene ID: Rep_165_c_5_20
Type: CAZyme
Location: 37184 - 39517 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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