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Cluster: Rep_165_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_165_c_3 Rep_165_c_3_86 113274 114689 - 3.D.1.2.1
TC Rep_165_c_3 Rep_165_c_3_87 114703 116190 - 3.D.1.5.1
TC Rep_165_c_3 Rep_165_c_3_88 116228 118267 - 3.D.9.1.1
TC Rep_165_c_3 Rep_165_c_3_89 118277 118585 - 3.D.1.8.1
TC Rep_165_c_3 Rep_165_c_3_90 118588 119112 - 3.D.9.1.1
STP Rep_165_c_3 Rep_165_c_3_91 119128 119652 - Fer4 | Fer4
TC Rep_165_c_3 Rep_165_c_3_92 119680 120765 - 3.D.1.5.1
TC Rep_165_c_3 Rep_165_c_3_93 120783 122345 - 3.D.1.5.1
TC Rep_165_c_3 Rep_165_c_3_94 122370 123029 - 3.D.1.3.1
TC Rep_165_c_3 Rep_165_c_3_95 123020 123370 - 3.D.1.8.1
peptidase Rep_165_c_3 Rep_165_c_3_96 123925 125115 - C11.UPW
CAZyme Rep_165_c_3 Rep_165_c_3_97 125214 125915 + GH25
Gene ID: Rep_165_c_3_86
Type: TC
Location: 113274 - 114689 (-)
Gene ID: Rep_165_c_3_87
Type: TC
Location: 114703 - 116190 (-)
Gene ID: Rep_165_c_3_88
Type: TC
Location: 116228 - 118267 (-)
Gene ID: Rep_165_c_3_89
Type: TC
Location: 118277 - 118585 (-)
Gene ID: Rep_165_c_3_90
Type: TC
Location: 118588 - 119112 (-)
Gene ID: Rep_165_c_3_91
Type: STP
Location: 119128 - 119652 (-)
Gene ID: Rep_165_c_3_92
Type: TC
Location: 119680 - 120765 (-)
Gene ID: Rep_165_c_3_93
Type: TC
Location: 120783 - 122345 (-)
Gene ID: Rep_165_c_3_94
Type: TC
Location: 122370 - 123029 (-)
Gene ID: Rep_165_c_3_95
Type: TC
Location: 123020 - 123370 (-)
Gene ID: Rep_165_c_3_96
Type: peptidase
Location: 123925 - 125115 (-)
Gene ID: Rep_165_c_3_97
Type: CAZyme
Location: 125214 - 125915 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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