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Cluster: Rep_165_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_165_c_2 Rep_165_c_2_154 186791 187714 + 3.D.6.1.2
TC Rep_165_c_2 Rep_165_c_2_155 187718 189067 + 3.D.6.1.2
TC Rep_165_c_2 Rep_165_c_2_156 189090 190094 + 3.D.6.1.2
TC Rep_165_c_2 Rep_165_c_2_157 190091 190726 + 3.D.6.1.2
TC Rep_165_c_2 Rep_165_c_2_158 190853 191434 + 3.D.6.1.2
TC Rep_165_c_2 Rep_165_c_2_159 191440 192042 + 3.D.6.1.2
CAZyme Rep_165_c_2 Rep_165_c_2_160 192264 193883 - GH29
Gene ID: Rep_165_c_2_154
Type: TC
Location: 186791 - 187714 (+)
Gene ID: Rep_165_c_2_155
Type: TC
Location: 187718 - 189067 (+)
Gene ID: Rep_165_c_2_156
Type: TC
Location: 189090 - 190094 (+)
Gene ID: Rep_165_c_2_157
Type: TC
Location: 190091 - 190726 (+)
Gene ID: Rep_165_c_2_158
Type: TC
Location: 190853 - 191434 (+)
Gene ID: Rep_165_c_2_159
Type: TC
Location: 191440 - 192042 (+)
Gene ID: Rep_165_c_2_160
Type: CAZyme
Location: 192264 - 193883 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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