dbCAN Logo

Cluster: Rep_165_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_165_c_2 Rep_165_c_2_98 116335 117558 + GH88
TC Rep_165_c_2 Rep_165_c_2_99 117584 120748 + 1.B.14.6.1
TC Rep_165_c_2 Rep_165_c_2_100 120818 122431 + 8.A.46.1.3
pfam Rep_165_c_2 Rep_165_c_2_101 122458 123432 + DUF5017
CAZyme Rep_165_c_2 Rep_165_c_2_102 123509 125146 + PL29
pfam Rep_165_c_2 Rep_165_c_2_103 125299 126246 + Mfa_like_1
pfam Rep_165_c_2 Rep_165_c_2_104 126293 127765 + Mfa_like_1
CAZyme Rep_165_c_2 Rep_165_c_2_105 127892 130294 + PL8_3
Gene ID: Rep_165_c_2_98
Type: CAZyme
Location: 116335 - 117558 (+)
Gene ID: Rep_165_c_2_99
Type: TC
Location: 117584 - 120748 (+)
Gene ID: Rep_165_c_2_100
Type: TC
Location: 120818 - 122431 (+)
Gene ID: Rep_165_c_2_101
Type: pfam
Location: 122458 - 123432 (+)
Gene ID: Rep_165_c_2_102
Type: CAZyme
Location: 123509 - 125146 (+)
Gene ID: Rep_165_c_2_103
Type: pfam
Location: 125299 - 126246 (+)
Gene ID: Rep_165_c_2_104
Type: pfam
Location: 126293 - 127765 (+)
Gene ID: Rep_165_c_2_105
Type: CAZyme
Location: 127892 - 130294 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List