Cluster: Rep_165_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_165
- CGC Family ID: CGCFAM_04641
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_165_c_10 | Rep_165_c_10_12 | 12005 | 13390 | - | 2.A.6.2.29 |
| TC | Rep_165_c_10 | Rep_165_c_10_13 | 13400 | 16654 | - | 2.A.6.2.16 |
| TC | Rep_165_c_10 | Rep_165_c_10_14 | 16681 | 17883 | - | 2.A.6.2.41 |
| CAZyme | Rep_165_c_10 | Rep_165_c_10_15 | 18431 | 19870 | - | GH140 |
| CAZyme | Rep_165_c_10 | Rep_165_c_10_16 | 19949 | 24064 | - | GH142 | GH143 | GH43_18 |
| TC | Rep_165_c_10 | Rep_165_c_10_17 | 24213 | 26696 | - | 9.B.144.1.4 |
Gene ID: Rep_165_c_10_12
Type: TC
Location: 12005 - 13390 (-)
Type: TC
Location: 12005 - 13390 (-)
Gene ID: Rep_165_c_10_13
Type: TC
Location: 13400 - 16654 (-)
Type: TC
Location: 13400 - 16654 (-)
Gene ID: Rep_165_c_10_14
Type: TC
Location: 16681 - 17883 (-)
Type: TC
Location: 16681 - 17883 (-)
Gene ID: Rep_165_c_10_15
Type: CAZyme
Location: 18431 - 19870 (-)
Type: CAZyme
Location: 18431 - 19870 (-)
Gene ID: Rep_165_c_10_16
Type: CAZyme
Location: 19949 - 24064 (-)
Type: CAZyme
Location: 19949 - 24064 (-)
Gene ID: Rep_165_c_10_17
Type: TC
Location: 24213 - 26696 (-)
Type: TC
Location: 24213 - 26696 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900770395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.