Cluster: Rep_165_CGC7
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_165
- CGC Family ID: CGCFAM_07059
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_165_c_0 | Rep_165_c_0_222 | 295571 | 297550 | + | 3.D.10.1.5 |
| TC | Rep_165_c_0 | Rep_165_c_0_223 | 297557 | 298315 | + | 3.D.10.1.5 |
| pfam | Rep_165_c_0 | Rep_165_c_0_224 | 298477 | 299142 | + | UDG |
| pfam | Rep_165_c_0 | Rep_165_c_0_225 | 299192 | 300481 | + | His_Phos_2 |
| CAZyme | Rep_165_c_0 | Rep_165_c_0_226 | 300465 | 302291 | + | GH141 |
| pfam | Rep_165_c_0 | Rep_165_c_0_227 | 302293 | 303744 | - | Polysacc_synt | Polysacc_synt_3 |
| TC | Rep_165_c_0 | Rep_165_c_0_228 | 303816 | 305048 | - | 9.B.156.3.1 |
| pfam | Rep_165_c_0 | Rep_165_c_0_229 | 305278 | 306624 | + | DUF4842 |
| pfam | Rep_165_c_0 | Rep_165_c_0_230 | 306892 | 307830 | + | Flavokinase | FAD_syn |
| CAZyme | Rep_165_c_0 | Rep_165_c_0_231 | 307888 | 310389 | - | GH115 |
| CAZyme | Rep_165_c_0 | Rep_165_c_0_232 | 310403 | 312922 | - | GH2 |
| TF | Rep_165_c_0 | Rep_165_c_0_233 | 312960 | 315482 | - | HTH_AraC |
| NULL(UNKNOWN) | Rep_165_c_0 | Rep_165_c_0_234 | 315521 | 316849 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_165_c_0 | Rep_165_c_0_235 | 316937 | 318916 | - | GH43_35 |
| CAZyme | Rep_165_c_0 | Rep_165_c_0_236 | 318963 | 320645 | - | CBM91 | GH43_10 |
| NULL(UNKNOWN) | Rep_165_c_0 | Rep_165_c_0_237 | 320661 | 320822 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_165_c_0 | Rep_165_c_0_238 | 320744 | 323314 | - | GH115 |
| CAZyme | Rep_165_c_0 | Rep_165_c_0_239 | 323660 | 326779 | - | GH98 |
Gene ID: Rep_165_c_0_222
Type: TC
Location: 295571 - 297550 (+)
Type: TC
Location: 295571 - 297550 (+)
Gene ID: Rep_165_c_0_223
Type: TC
Location: 297557 - 298315 (+)
Type: TC
Location: 297557 - 298315 (+)
Gene ID: Rep_165_c_0_224
Type: pfam
Location: 298477 - 299142 (+)
Type: pfam
Location: 298477 - 299142 (+)
Gene ID: Rep_165_c_0_225
Type: pfam
Location: 299192 - 300481 (+)
Type: pfam
Location: 299192 - 300481 (+)
Gene ID: Rep_165_c_0_226
Type: CAZyme
Location: 300465 - 302291 (+)
Type: CAZyme
Location: 300465 - 302291 (+)
Gene ID: Rep_165_c_0_227
Type: pfam
Location: 302293 - 303744 (-)
Type: pfam
Location: 302293 - 303744 (-)
Gene ID: Rep_165_c_0_228
Type: TC
Location: 303816 - 305048 (-)
Type: TC
Location: 303816 - 305048 (-)
Gene ID: Rep_165_c_0_229
Type: pfam
Location: 305278 - 306624 (+)
Type: pfam
Location: 305278 - 306624 (+)
Gene ID: Rep_165_c_0_230
Type: pfam
Location: 306892 - 307830 (+)
Type: pfam
Location: 306892 - 307830 (+)
Gene ID: Rep_165_c_0_231
Type: CAZyme
Location: 307888 - 310389 (-)
Type: CAZyme
Location: 307888 - 310389 (-)
Gene ID: Rep_165_c_0_232
Type: CAZyme
Location: 310403 - 312922 (-)
Type: CAZyme
Location: 310403 - 312922 (-)
Gene ID: Rep_165_c_0_233
Type: TF
Location: 312960 - 315482 (-)
Type: TF
Location: 312960 - 315482 (-)
Gene ID: Rep_165_c_0_234
Type:
Location: 315521 - 316849 (-)
Type:
Location: 315521 - 316849 (-)
Gene ID: Rep_165_c_0_235
Type: CAZyme
Location: 316937 - 318916 (-)
Type: CAZyme
Location: 316937 - 318916 (-)
Gene ID: Rep_165_c_0_236
Type: CAZyme
Location: 318963 - 320645 (-)
Type: CAZyme
Location: 318963 - 320645 (-)
Gene ID: Rep_165_c_0_237
Type:
Location: 320661 - 320822 (+)
Type:
Location: 320661 - 320822 (+)
Gene ID: Rep_165_c_0_238
Type: CAZyme
Location: 320744 - 323314 (-)
Type: CAZyme
Location: 320744 - 323314 (-)
Gene ID: Rep_165_c_0_239
Type: CAZyme
Location: 323660 - 326779 (-)
Type: CAZyme
Location: 323660 - 326779 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900770395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_165_c_0_224 | vegan > omnivore | 3.45167 | 0.01141 |