Genome Details
Selected Rep_genome_ID: HRGMv2_4558
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp934481445
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4558 | 2,712,434 | 98.65% | 0.671% | Congo | Africa | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_H_24_1651.175 | 2,430,698 | 92.62% | 1.01% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4558_CGC23 | CGCFAM_00215 | Yes | 13 | 5 | alpha-glucan |
| HRGMv2_4558_CGC19 | CGCFAM_00794 | Yes | 5 | 1 | |
| HRGMv2_4558_CGC15 | CGCFAM_01096 | Yes | 3 | 1 | |
| HRGMv2_4558_CGC13 | CGCFAM_02398 | Yes | 8 | 1 | |
| HRGMv2_4558_CGC9 | CGCFAM_02399 | Yes | 4 | 1 | |
| HRGMv2_4558_CGC18 | CGCFAM_02631 | Yes | 4 | 1 | |
| HRGMv2_4558_CGC17 | CGCFAM_02660 | Yes | 4 | 1 | |
| HRGMv2_4558_CGC29 | CGCFAM_03131 | Yes | 3 | 1 | |
| HRGMv2_4558_CGC6 | CGCFAM_07666 | Yes | 7 | 4 | |
| HRGMv2_4558_CGC4 | CGCFAM_07667 | Yes | 3 | 1 | |
| HRGMv2_4558_CGC26 | CGCFAM_07668 | Yes | 7 | 1 | |
| HRGMv2_4558_CGC28 | CGCFAM_07669 | Yes | 3 | 1 | |
| HRGMv2_4558_CGC25 | CGCFAM_07670 | Yes | 6 | 1 | |
| HRGMv2_4558_CGC21 | CGCFAM_07671 | Yes | 9 | 2 | |
| HRGMv2_4558_CGC1 | CGCFAM_07672 | Yes | 8 | 2 |
Top CAZyme Families