Cluster: HRGMv2_4558_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4558
- CGC Family ID: CGCFAM_02399
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4558_14 | HRGMv2_4558_14_15 | 15326 | 16360 | + | 3.A.1.24.6 |
| TC | HRGMv2_4558_14 | HRGMv2_4558_14_16 | 16353 | 17033 | + | 3.A.1.24.2 |
| TC | HRGMv2_4558_14 | HRGMv2_4558_14_17 | 17066 | 18022 | + | 3.A.1.24.6 |
| CAZyme | HRGMv2_4558_14 | HRGMv2_4558_14_18 | 18043 | 19404 | + | AA4 |
Gene ID: HRGMv2_4558_14_15
Type: TC
Location: 15326 - 16360 (+)
Type: TC
Location: 15326 - 16360 (+)
Gene ID: HRGMv2_4558_14_16
Type: TC
Location: 16353 - 17033 (+)
Type: TC
Location: 16353 - 17033 (+)
Gene ID: HRGMv2_4558_14_17
Type: TC
Location: 17066 - 18022 (+)
Type: TC
Location: 17066 - 18022 (+)
Gene ID: HRGMv2_4558_14_18
Type: CAZyme
Location: 18043 - 19404 (+)
Type: CAZyme
Location: 18043 - 19404 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp934481445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.