Cluster: HRGMv2_4558_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4558
- CGC Family ID: CGCFAM_02631
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4558_31 | HRGMv2_4558_31_19 | 23234 | 24622 | - | 2.A.66.1.33 |
| NULL(UNKNOWN) | HRGMv2_4558_31 | HRGMv2_4558_31_20 | 24659 | 25510 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_4558_31 | HRGMv2_4558_31_21 | 25523 | 25687 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4558_31 | HRGMv2_4558_31_22 | 25815 | 27131 | - | GH5_4 |
Gene ID: HRGMv2_4558_31_19
Type: TC
Location: 23234 - 24622 (-)
Type: TC
Location: 23234 - 24622 (-)
Gene ID: HRGMv2_4558_31_20
Type:
Location: 24659 - 25510 (-)
Type:
Location: 24659 - 25510 (-)
Gene ID: HRGMv2_4558_31_21
Type:
Location: 25523 - 25687 (-)
Type:
Location: 25523 - 25687 (-)
Gene ID: HRGMv2_4558_31_22
Type: CAZyme
Location: 25815 - 27131 (-)
Type: CAZyme
Location: 25815 - 27131 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp934481445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.