PROTEIN: HRGMv2_4558_31_20
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Protein File & Metadata
Source:
HRGMv2_4558_31_20.pdb
Genome ID:
Protein ID:
HRGMv2_4558_31_20
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Protein Sequence
MILMLIVTAC YTITSLSDKY AVSRLKMDGN TLTWLMAAAT SLFMIAYLPF DSLLFTLSWQ 60 SFAAVGLMVL SKLLEFRLSA IVLKEMSAFE LKAWLGVTVL FSYITDLVCG SAGTIAVIIC 120 RLAFIAATAA GLFMIARSGG ERVHYKKIIL PLAGYLLAKF GYGLIVNMTK EYISSTLSLF 180 IALVILTIVL APAVHPIRLF KEKTKGSVII ALTKIPNVIG LILENAIAAQ SMANYSFIQP 240 MILAALFFIG LFRHEQVSRL NIAGGIVCIA GVLGFQAVPL IIH 283
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1P2-F1-model_v4 | 1 | 282 | 9 | 290 | 0.815 |
0.8528 |
| AF-Q9HYN8-F1-model_v4 | 1 | 283 | 9 | 292 | 0.8099 |
0.8464 |
| AF-Q9I5Z7-F1-model_v4 | 1 | 277 | 4 | 276 | 0.7982 |
0.8432 |
| AF-P44170-F1-model_v4 | 1 | 283 | 1 | 291 | 0.7944 |
0.8325 |
| AF-K0F5D2-F1-model_v4 | 1 | 283 | 13 | 295 | 0.7922 |
0.8503 |
| AF-A0A0H3GK88-F1-model_v4 | 1 | 283 | 10 | 293 | 0.7883 |
0.8265 |
| AF-Q9HV29-F1-model_v4 | 1 | 283 | 6 | 287 | 0.7864 |
0.8318 |
| AF-A0A132Z592-F1-model_v4 | 1 | 283 | 3 | 288 | 0.7861 |
0.8196 |
| AF-Q09875-F1-model_v4 | 1 | 283 | 1 | 323 | 0.7853 |
0.859 |
| AF-A0A0H3GRE4-F1-model_v4 | 1 | 283 | 7 | 285 | 0.7833 |
0.841 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 283 | 453 | 773 | 0.5601 |
0.8327 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 283 | 381 | 671 | 0.5784 |
0.8277 |
| A0A3P6AF83 | GH28 | 1 | 283 | 453 | 773 | 0.5601 |
0.8327 |
| A0A7H8KSK8 | GT51 | 1 | 283 | 822 | 1113 | 0.4919 |
0.7941 |
| A0A4D6KI88 | GH1 | 1 | 283 | 100 | 396 | 0.4854 |
0.7575 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ogk-assembly2.cif.gz_C | 1 | 283 | 8 | 292 | 0.7709 |
0.8121 |
| 5ogk-assembly1.cif.gz_B | 1 | 283 | 4 | 295 | 0.7704 |
0.816 |
| 5ogk-assembly1.cif.gz_A | 1 | 283 | 4 | 290 | 0.7676 |
0.8072 |
| 5oge-assembly2.cif.gz_B | 1 | 283 | 7 | 297 | 0.7652 |
0.8135 |
| 5oge-assembly3.cif.gz_H-2 | 1 | 283 | 7 | 297 | 0.765 |
0.8133 |
| 6qsk-assembly2.cif.gz_G-2 | 1 | 283 | 5 | 294 | 0.7646 |
0.8091 |
| 6qsk-assembly1.cif.gz_A | 1 | 283 | 4 | 290 | 0.7637 |
0.8034 |
| 5oge-assembly4.cif.gz_D | 1 | 283 | 10 | 301 | 0.7619 |
0.8141 |
| 5oge-assembly3.cif.gz_C | 1 | 283 | 7 | 300 | 0.7612 |
0.8129 |
| 5oge-assembly1.cif.gz_E | 1 | 283 | 7 | 302 | 0.7596 |
0.8134 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-F8JJ22-F1-model_v4 | 1 | 283 | 7 | 290 | 0.8182 |
0.8604 |
| AF-O29740-F1-model_v4 | 1 | 283 | 6 | 289 | 0.8065 |
0.8406 |
| AF-O34416-F1-model_v4 | 1 | 283 | 5 | 290 | 0.7992 |
0.8371 |
| AF-P44170-F1-model_v4 | 1 | 283 | 1 | 291 | 0.7944 |
0.8325 |
| AF-P96680-F1-model_v4 | 1 | 282 | 9 | 289 | 0.7919 |
0.851 |
| AF-O32256-F1-model_v4 | 1 | 283 | 10 | 296 | 0.7887 |
0.8421 |
| AF-Q09875-F1-model_v4 | 1 | 283 | 1 | 323 | 0.7853 |
0.859 |
| AF-P0ABT8-F1-model_v4 | 1 | 283 | 12 | 295 | 0.7829 |
0.8303 |
| AF-P0ABT9-F1-model_v4 | 1 | 283 | 12 | 295 | 0.7816 |
0.8293 |
| AF-P39649-F1-model_v4 | 1 | 280 | 7 | 285 | 0.777 |
0.8317 |