dbCAN Logo

Cluster: HRGMv2_4558_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4558_20 HRGMv2_4558_20_19 20767 22236 - 2.A.50.2.1
CAZyme HRGMv2_4558_20 HRGMv2_4558_20_20 22391 23110 - GT51
TC HRGMv2_4558_20 HRGMv2_4558_20_21 23114 25135 - 3.A.1.134.4
TC HRGMv2_4558_20 HRGMv2_4558_20_22 25132 25908 - 3.A.1.134.4
TC HRGMv2_4558_20 HRGMv2_4558_20_23 26019 27209 - 2.A.36.2.1
TF HRGMv2_4558_20 HRGMv2_4558_20_24 27404 28111 - Trans_reg_C
STP HRGMv2_4558_20 HRGMv2_4558_20_25 28111 29178 - HATPase_c | HisKA
TC HRGMv2_4558_20 HRGMv2_4558_20_26 29348 30961 + 2.A.25.1.9
Gene ID: HRGMv2_4558_20_19
Type: TC
Location: 20767 - 22236 (-)
Gene ID: HRGMv2_4558_20_20
Type: CAZyme
Location: 22391 - 23110 (-)
Gene ID: HRGMv2_4558_20_21
Type: TC
Location: 23114 - 25135 (-)
Gene ID: HRGMv2_4558_20_22
Type: TC
Location: 25132 - 25908 (-)
Gene ID: HRGMv2_4558_20_23
Type: TC
Location: 26019 - 27209 (-)
Gene ID: HRGMv2_4558_20_24
Type: TF
Location: 27404 - 28111 (-)
Gene ID: HRGMv2_4558_20_25
Type: STP
Location: 28111 - 29178 (-)
Gene ID: HRGMv2_4558_20_26
Type: TC
Location: 29348 - 30961 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List