dbCAN Logo

Cluster: HRGMv2_4558_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4558_35 HRGMv2_4558_35_3 2199 5627 + GH2
peptidase HRGMv2_4558_35 HRGMv2_4558_35_4 5773 6402 + C40.UNW
TC HRGMv2_4558_35 HRGMv2_4558_35_5 6454 7884 - 1.A.26.1.3
pfam HRGMv2_4558_35 HRGMv2_4558_35_6 8524 9543 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
TC HRGMv2_4558_35 HRGMv2_4558_35_7 9661 11757 - 4.A.1.1.9
STP HRGMv2_4558_35 HRGMv2_4558_35_8 11904 12506 - TetR_N
TC HRGMv2_4558_35 HRGMv2_4558_35_9 12683 13678 - 8.A.5.1.6
CAZyme HRGMv2_4558_35 HRGMv2_4558_35_10 13688 14746 - GH5_8
TC HRGMv2_4558_35 HRGMv2_4558_35_11 14760 16043 - 9.B.34.1.3
Gene ID: HRGMv2_4558_35_3
Type: CAZyme
Location: 2199 - 5627 (+)
Gene ID: HRGMv2_4558_35_4
Type: peptidase
Location: 5773 - 6402 (+)
Gene ID: HRGMv2_4558_35_5
Type: TC
Location: 6454 - 7884 (-)
Gene ID: HRGMv2_4558_35_6
Type: pfam
Location: 8524 - 9543 (-)
Gene ID: HRGMv2_4558_35_7
Type: TC
Location: 9661 - 11757 (-)
Gene ID: HRGMv2_4558_35_8
Type: STP
Location: 11904 - 12506 (-)
Gene ID: HRGMv2_4558_35_9
Type: TC
Location: 12683 - 13678 (-)
Gene ID: HRGMv2_4558_35_10
Type: CAZyme
Location: 13688 - 14746 (-)
Gene ID: HRGMv2_4558_35_11
Type: TC
Location: 14760 - 16043 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List