Cluster: HRGMv2_4558_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4558
- CGC Family ID: CGCFAM_07667
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4558_7 | HRGMv2_4558_7_42 | 55085 | 57559 | - | GH94 |
| pfam | HRGMv2_4558_7 | HRGMv2_4558_7_43 | 57847 | 58983 | + | TGT |
| TC | HRGMv2_4558_7 | HRGMv2_4558_7_44 | 59029 | 59601 | + | 2.A.107.1.2 |
Gene ID: HRGMv2_4558_7_42
Type: CAZyme
Location: 55085 - 57559 (-)
Type: CAZyme
Location: 55085 - 57559 (-)
Gene ID: HRGMv2_4558_7_43
Type: pfam
Location: 57847 - 58983 (+)
Type: pfam
Location: 57847 - 58983 (+)
Gene ID: HRGMv2_4558_7_44
Type: TC
Location: 59029 - 59601 (+)
Type: TC
Location: 59029 - 59601 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp934481445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.