Cluster: HRGMv2_4558_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4558
- CGC Family ID: CGCFAM_02660
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4558_31 | HRGMv2_4558_31_11 | 12439 | 14817 | - | 3.A.9.1.2 |
| pfam | HRGMv2_4558_31 | HRGMv2_4558_31_12 | 15087 | 15542 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | HRGMv2_4558_31 | HRGMv2_4558_31_13 | 15557 | 16030 | - | GtrA_DPMS_TM |
| CAZyme | HRGMv2_4558_31 | HRGMv2_4558_31_14 | 16138 | 17403 | - | GH27 |
Gene ID: HRGMv2_4558_31_11
Type: TC
Location: 12439 - 14817 (-)
Type: TC
Location: 12439 - 14817 (-)
Gene ID: HRGMv2_4558_31_12
Type: pfam
Location: 15087 - 15542 (-)
Type: pfam
Location: 15087 - 15542 (-)
Gene ID: HRGMv2_4558_31_13
Type: pfam
Location: 15557 - 16030 (-)
Type: pfam
Location: 15557 - 16030 (-)
Gene ID: HRGMv2_4558_31_14
Type: CAZyme
Location: 16138 - 17403 (-)
Type: CAZyme
Location: 16138 - 17403 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp934481445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.