Cluster: HRGMv2_4558_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4558
- CGC Family ID: CGCFAM_03131
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4558_100 | HRGMv2_4558_100_3 | 1409 | 2890 | - | GH51_1 |
| TF | HRGMv2_4558_100 | HRGMv2_4558_100_4 | 3013 | 3771 | + | HTH_AraC |
| TC | HRGMv2_4558_100 | HRGMv2_4558_100_5 | 3948 | 4466 | + | 2.A.88.9.2 |
Gene ID: HRGMv2_4558_100_3
Type: CAZyme
Location: 1409 - 2890 (-)
Type: CAZyme
Location: 1409 - 2890 (-)
Gene ID: HRGMv2_4558_100_4
Type: TF
Location: 3013 - 3771 (+)
Type: TF
Location: 3013 - 3771 (+)
Gene ID: HRGMv2_4558_100_5
Type: TC
Location: 3948 - 4466 (+)
Type: TC
Location: 3948 - 4466 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp934481445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.