Cluster: HRGMv2_4558_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4558
- CGC Family ID: CGCFAM_07669
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4558_98 | HRGMv2_4558_98_3 | 2866 | 3129 | - | 8.A.8.1.4 |
| pfam | HRGMv2_4558_98 | HRGMv2_4558_98_4 | 3608 | 5218 | - | VWA_4 |
| CAZyme | HRGMv2_4558_98 | HRGMv2_4558_98_5 | 5617 | 6627 | + | GH130_2 |
Gene ID: HRGMv2_4558_98_3
Type: TC
Location: 2866 - 3129 (-)
Type: TC
Location: 2866 - 3129 (-)
Gene ID: HRGMv2_4558_98_4
Type: pfam
Location: 3608 - 5218 (-)
Type: pfam
Location: 3608 - 5218 (-)
Gene ID: HRGMv2_4558_98_5
Type: CAZyme
Location: 5617 - 6627 (+)
Type: CAZyme
Location: 5617 - 6627 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp934481445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.