Genome Details
Selected Rep_genome_ID: HRGMv2_4525
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4525 | 3,112,541 | 95.57% | 1.587% | Japan | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4525_CGC18 | CGCFAM_00004 | Yes | 7 | 2 | alpha-glucan |
| HRGMv2_4525_CGC29 | CGCFAM_00070 | Yes | 4 | 2 | |
| HRGMv2_4525_CGC21 | CGCFAM_00098 | Yes | 9 | 6 | |
| HRGMv2_4525_CGC2 | CGCFAM_00126 | Yes | 3 | 1 | |
| HRGMv2_4525_CGC6 | CGCFAM_00133 | Yes | 11 | 1 | |
| HRGMv2_4525_CGC8 | CGCFAM_00353 | Yes | 12 | 4 | |
| HRGMv2_4525_CGC15 | CGCFAM_00419 | Yes | 7 | 3 | |
| HRGMv2_4525_CGC14 | CGCFAM_00591 | Yes | 7 | 2 | |
| HRGMv2_4525_CGC40 | CGCFAM_01121 | Yes | 4 | 1 | |
| HRGMv2_4525_CGC16 | CGCFAM_01151 | Yes | 5 | 2 | |
| HRGMv2_4525_CGC26 | CGCFAM_01697 | Yes | 7 | 2 | |
| HRGMv2_4525_CGC39 | CGCFAM_02385 | Yes | 10 | 3 | |
| HRGMv2_4525_CGC41 | CGCFAM_02394 | Yes | 9 | 3 | |
| HRGMv2_4525_CGC44 | CGCFAM_06114 | Yes | 3 | 1 | |
| HRGMv2_4525_CGC33 | CGCFAM_06221 | Yes | 4 | 1 |
Top CAZyme Families