Cluster: HRGMv2_4525_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- CGC Family ID: CGCFAM_00126
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4525_1 | HRGMv2_4525_1_73 | 83466 | 84251 | + | 2.A.102.4.4 |
| pfam | HRGMv2_4525_1 | HRGMv2_4525_1_74 | 84338 | 85438 | - | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | HRGMv2_4525_1 | HRGMv2_4525_1_75 | 85453 | 86469 | - | GT2 |
Gene ID: HRGMv2_4525_1_73
Type: TC
Location: 83466 - 84251 (+)
Type: TC
Location: 83466 - 84251 (+)
Gene ID: HRGMv2_4525_1_74
Type: pfam
Location: 84338 - 85438 (-)
Type: pfam
Location: 84338 - 85438 (-)
Gene ID: HRGMv2_4525_1_75
Type: CAZyme
Location: 85453 - 86469 (-)
Type: CAZyme
Location: 85453 - 86469 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.