dbCAN Logo

Cluster: HRGMv2_4525_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4525_2 HRGMv2_4525_2_91 106646 108106 + 2.A.21.2.5
pfam HRGMv2_4525_2 HRGMv2_4525_2_92 108246 108818 - Flavin_Reduct
TF HRGMv2_4525_2 HRGMv2_4525_2_93 109048 109380 + DUF24
TC HRGMv2_4525_2 HRGMv2_4525_2_94 109506 110306 - 8.A.5.1.4
NULL(UNKNOWN) HRGMv2_4525_2 HRGMv2_4525_2_95 110342 110857 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4525_2 HRGMv2_4525_2_96 111297 113084 - 8.A.59.2.1
TF HRGMv2_4525_2 HRGMv2_4525_2_97 113074 114183 - HTH_AraC
TC HRGMv2_4525_2 HRGMv2_4525_2_98 114394 115320 + 3.A.1.1.29
TC HRGMv2_4525_2 HRGMv2_4525_2_99 115336 116250 + 3.A.1.1.29
STP HRGMv2_4525_2 HRGMv2_4525_2_100 116311 117888 + SBP_bac_1
CAZyme HRGMv2_4525_2 HRGMv2_4525_2_101 118007 119668 + GH123
Gene ID: HRGMv2_4525_2_91
Type: TC
Location: 106646 - 108106 (+)
Gene ID: HRGMv2_4525_2_92
Type: pfam
Location: 108246 - 108818 (-)
Gene ID: HRGMv2_4525_2_93
Type: TF
Location: 109048 - 109380 (+)
Gene ID: HRGMv2_4525_2_94
Type: TC
Location: 109506 - 110306 (-)
Gene ID: HRGMv2_4525_2_95
Type:
Location: 110342 - 110857 (-)
Gene ID: HRGMv2_4525_2_96
Type: TC
Location: 111297 - 113084 (-)
Gene ID: HRGMv2_4525_2_97
Type: TF
Location: 113074 - 114183 (-)
Gene ID: HRGMv2_4525_2_98
Type: TC
Location: 114394 - 115320 (+)
Gene ID: HRGMv2_4525_2_99
Type: TC
Location: 115336 - 116250 (+)
Gene ID: HRGMv2_4525_2_100
Type: STP
Location: 116311 - 117888 (+)
Gene ID: HRGMv2_4525_2_101
Type: CAZyme
Location: 118007 - 119668 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4525_2_92 vegetarian > vegan 3.10952 0.01882

🧭 Explore Read Mapping of CGC

← Back to Cluster List