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Cluster: HRGMv2_4525_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4525_14 HRGMv2_4525_14_1 629 2203 + GH33
TC HRGMv2_4525_14 HRGMv2_4525_14_2 2294 3949 + 3.A.1.5.18
TC HRGMv2_4525_14 HRGMv2_4525_14_3 4118 5074 + 3.A.1.5.20
TC HRGMv2_4525_14 HRGMv2_4525_14_4 5096 5986 + 3.A.1.5.20
TC HRGMv2_4525_14 HRGMv2_4525_14_5 6000 7016 + 3.A.1.5.12
TC HRGMv2_4525_14 HRGMv2_4525_14_6 7018 8019 + 3.A.1.5.20
CAZyme HRGMv2_4525_14 HRGMv2_4525_14_7 8060 9511 + GH165
Gene ID: HRGMv2_4525_14_1
Type: CAZyme
Location: 629 - 2203 (+)
Gene ID: HRGMv2_4525_14_2
Type: TC
Location: 2294 - 3949 (+)
Gene ID: HRGMv2_4525_14_3
Type: TC
Location: 4118 - 5074 (+)
Gene ID: HRGMv2_4525_14_4
Type: TC
Location: 5096 - 5986 (+)
Gene ID: HRGMv2_4525_14_5
Type: TC
Location: 6000 - 7016 (+)
Gene ID: HRGMv2_4525_14_6
Type: TC
Location: 7018 - 8019 (+)
Gene ID: HRGMv2_4525_14_7
Type: CAZyme
Location: 8060 - 9511 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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