Cluster: HRGMv2_4525_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4525
- CGC Family ID: CGCFAM_01151
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4525_7 | HRGMv2_4525_7_44 | 46330 | 48738 | + | GT35 |
| CAZyme | HRGMv2_4525_7 | HRGMv2_4525_7_45 | 48914 | 50734 | + | GH13_39 |
| TF | HRGMv2_4525_7 | HRGMv2_4525_7_46 | 50919 | 51278 | + | PadR |
| pfam | HRGMv2_4525_7 | HRGMv2_4525_7_47 | 51265 | 52089 | + | NfeD |
| TC | HRGMv2_4525_7 | HRGMv2_4525_7_48 | 52126 | 53019 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_4525_7_44
Type: CAZyme
Location: 46330 - 48738 (+)
Type: CAZyme
Location: 46330 - 48738 (+)
Gene ID: HRGMv2_4525_7_45
Type: CAZyme
Location: 48914 - 50734 (+)
Type: CAZyme
Location: 48914 - 50734 (+)
Gene ID: HRGMv2_4525_7_46
Type: TF
Location: 50919 - 51278 (+)
Type: TF
Location: 50919 - 51278 (+)
Gene ID: HRGMv2_4525_7_47
Type: pfam
Location: 51265 - 52089 (+)
Type: pfam
Location: 51265 - 52089 (+)
Gene ID: HRGMv2_4525_7_48
Type: TC
Location: 52126 - 53019 (+)
Type: TC
Location: 52126 - 53019 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.