Cluster: HRGMv2_4525_CGC40
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- CGC Family ID: CGCFAM_01121
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4525_38 | HRGMv2_4525_38_5 | 6274 | 7263 | + | GT2 |
| pfam | HRGMv2_4525_38 | HRGMv2_4525_38_6 | 7282 | 7917 | + | LUD_dom |
| sulfatase | HRGMv2_4525_38 | HRGMv2_4525_38_7 | 8256 | 9431 | - | S1_7 |
| TC | HRGMv2_4525_38 | HRGMv2_4525_38_8 | 9550 | 11391 | - | 1.A.33.1.4 |
Gene ID: HRGMv2_4525_38_5
Type: CAZyme
Location: 6274 - 7263 (+)
Type: CAZyme
Location: 6274 - 7263 (+)
Gene ID: HRGMv2_4525_38_6
Type: pfam
Location: 7282 - 7917 (+)
Type: pfam
Location: 7282 - 7917 (+)
Gene ID: HRGMv2_4525_38_7
Type: sulfatase
Location: 8256 - 9431 (-)
Type: sulfatase
Location: 8256 - 9431 (-)
Gene ID: HRGMv2_4525_38_8
Type: TC
Location: 9550 - 11391 (-)
Type: TC
Location: 9550 - 11391 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.