Cluster: HRGMv2_4525_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4525
- CGC Family ID: CGCFAM_06221
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4525_29 | HRGMv2_4525_29_21 | 19577 | 21448 | + | 3.A.3.6.10 |
| pfam | HRGMv2_4525_29 | HRGMv2_4525_29_22 | 21512 | 21829 | - | Phage_holin_5_2 |
| NULL(UNKNOWN) | HRGMv2_4525_29 | HRGMv2_4525_29_23 | 21860 | 22168 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4525_29 | HRGMv2_4525_29_24 | 22183 | 23067 | - | GH25 |
Gene ID: HRGMv2_4525_29_21
Type: TC
Location: 19577 - 21448 (+)
Type: TC
Location: 19577 - 21448 (+)
Gene ID: HRGMv2_4525_29_22
Type: pfam
Location: 21512 - 21829 (-)
Type: pfam
Location: 21512 - 21829 (-)
Gene ID: HRGMv2_4525_29_23
Type:
Location: 21860 - 22168 (-)
Type:
Location: 21860 - 22168 (-)
Gene ID: HRGMv2_4525_29_24
Type: CAZyme
Location: 22183 - 23067 (-)
Type: CAZyme
Location: 22183 - 23067 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4525_29_21 | vegetarian > vegan | 1.06227 | 0.00455 |