Cluster: HRGMv2_4525_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4525
- CGC Family ID: CGCFAM_00591
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4525_6 | HRGMv2_4525_6_36 | 40347 | 41396 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_4525_6 | HRGMv2_4525_6_37 | 41679 | 43937 | - | GH36 |
| TC | HRGMv2_4525_6 | HRGMv2_4525_6_38 | 44076 | 44912 | - | 3.A.1.1.34 |
| TC | HRGMv2_4525_6 | HRGMv2_4525_6_39 | 44916 | 45800 | - | 3.A.1.1.11 |
| TC | HRGMv2_4525_6 | HRGMv2_4525_6_40 | 45811 | 47079 | - | 3.A.1.1.44 |
| TF | HRGMv2_4525_6 | HRGMv2_4525_6_41 | 47301 | 48281 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4525_6 | HRGMv2_4525_6_42 | 48346 | 51312 | - | GH2 |
Gene ID: HRGMv2_4525_6_36
Type: TC
Location: 40347 - 41396 (-)
Type: TC
Location: 40347 - 41396 (-)
Gene ID: HRGMv2_4525_6_37
Type: CAZyme
Location: 41679 - 43937 (-)
Type: CAZyme
Location: 41679 - 43937 (-)
Gene ID: HRGMv2_4525_6_38
Type: TC
Location: 44076 - 44912 (-)
Type: TC
Location: 44076 - 44912 (-)
Gene ID: HRGMv2_4525_6_39
Type: TC
Location: 44916 - 45800 (-)
Type: TC
Location: 44916 - 45800 (-)
Gene ID: HRGMv2_4525_6_40
Type: TC
Location: 45811 - 47079 (-)
Type: TC
Location: 45811 - 47079 (-)
Gene ID: HRGMv2_4525_6_41
Type: TF
Location: 47301 - 48281 (+)
Type: TF
Location: 47301 - 48281 (+)
Gene ID: HRGMv2_4525_6_42
Type: CAZyme
Location: 48346 - 51312 (-)
Type: CAZyme
Location: 48346 - 51312 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.