Cluster: HRGMv2_4525_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4525
- CGC Family ID: CGCFAM_00419
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4525_6 | HRGMv2_4525_6_66 | 75912 | 78356 | - | GH3 |
| TC | HRGMv2_4525_6 | HRGMv2_4525_6_67 | 78462 | 79307 | - | 3.A.1.1.13 |
| TC | HRGMv2_4525_6 | HRGMv2_4525_6_68 | 79304 | 80242 | - | 3.A.1.1.4 |
| NULL(UNKNOWN) | HRGMv2_4525_6 | HRGMv2_4525_6_69 | 80325 | 81713 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4525_6 | HRGMv2_4525_6_70 | 81993 | 82739 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4525_6 | HRGMv2_4525_6_71 | 82807 | 85221 | - | GH94 |
| CAZyme | HRGMv2_4525_6 | HRGMv2_4525_6_72 | 85241 | 87937 | - | GH94 |
Gene ID: HRGMv2_4525_6_66
Type: CAZyme
Location: 75912 - 78356 (-)
Type: CAZyme
Location: 75912 - 78356 (-)
Gene ID: HRGMv2_4525_6_67
Type: TC
Location: 78462 - 79307 (-)
Type: TC
Location: 78462 - 79307 (-)
Gene ID: HRGMv2_4525_6_68
Type: TC
Location: 79304 - 80242 (-)
Type: TC
Location: 79304 - 80242 (-)
Gene ID: HRGMv2_4525_6_69
Type:
Location: 80325 - 81713 (-)
Type:
Location: 80325 - 81713 (-)
Gene ID: HRGMv2_4525_6_70
Type: TF
Location: 81993 - 82739 (+)
Type: TF
Location: 81993 - 82739 (+)
Gene ID: HRGMv2_4525_6_71
Type: CAZyme
Location: 82807 - 85221 (-)
Type: CAZyme
Location: 82807 - 85221 (-)
Gene ID: HRGMv2_4525_6_72
Type: CAZyme
Location: 85241 - 87937 (-)
Type: CAZyme
Location: 85241 - 87937 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.