PROTEIN: HRGMv2_4525_6_69
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Protein File & Metadata
Source:
HRGMv2_4525_6_69.pdb
Genome ID:
Protein ID:
HRGMv2_4525_6_69
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Protein Sequence
MKKRVVSLLM ATAISASLLA ACSGSTSGAA NAGGEAASAE GAVINIYSWN DEFRTRLEAI 60 YPEVESTSAD GTVTTLKDGT EIHWIINPNQ DGVYQQKLDE ALLNQASAAA DDKVDIFLSE 120 TDYVFKYTDA DADVAMPLTD LGIDPDTDLA DQYDFTRTTA SDQNGVQRGS TWQCCPGLLV 180 YRRDIAKDVF GTDDPVAVGE KVKDWDTLKA TAEELKAKGY YTFASYADTF RLYGNSISQP 240 WVAAGETTVK VDQQIMNWIN SSKEWLDAGY FDKTVKGQWN DDWNKSMSSS SKVFAFLLPA 300 WGIDFTLNPN WDGEDGVWGV TNPPQEYNWG GSYIHAATGT DNPEHVKDII LSLTADKDNL 360 IKISRDYMDF TNTVSGMQEA ATDESFASAF LGGQNPYEYF APVAENIQIA PLSSYDQGCV 420 ELIQNAFSDY FQGNVDYDRA KSNFETAIKE RYPDVTEIQW AE 462
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 3 | 455 | 33 | 439 | 0.7211 |
0.8104 |
| AF-A0A133CPC5-F1-model_v4 | 37 | 456 | 31 | 423 | 0.6951 |
0.7953 |
| AF-K0F8J3-F1-model_v4 | 40 | 456 | 29 | 436 | 0.6928 |
0.7778 |
| AF-K0EMP7-F1-model_v4 | 27 | 456 | 15 | 443 | 0.6917 |
0.7488 |
| AF-O53485-F1-model_v4 | 41 | 456 | 35 | 439 | 0.6901 |
0.7815 |
| AF-Q8DNU8-F1-model_v4 | 39 | 456 | 38 | 440 | 0.6898 |
0.787 |
| AF-Q9CBN6-F1-model_v4 | 40 | 454 | 38 | 446 | 0.688 |
0.7779 |
| AF-A0A133CKQ7-F1-model_v4 | 39 | 456 | 37 | 419 | 0.6869 |
0.7999 |
| AF-A0A132Z3C8-F1-model_v4 | 41 | 454 | 32 | 428 | 0.681 |
0.7782 |
| AF-A0A133CDW9-F1-model_v4 | 40 | 457 | 43 | 442 | 0.6789 |
0.7826 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7U1BNH7 | GH10 | 39 | 460 | 28 | 738 | 0.542 |
0.7324 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 41 | 453 | 1 | 393 | 0.8278 |
0.9068 |
| 3uor-assembly2.cif.gz_B | 42 | 457 | 1 | 389 | 0.762 |
0.8487 |
| 6dtr-assembly1.cif.gz_A | 39 | 456 | 1 | 393 | 0.743 |
0.8198 |
| 6x84-assembly2.cif.gz_B | 39 | 456 | 1 | 411 | 0.7419 |
0.8048 |
| 7nbz-assembly1.cif.gz_A | 39 | 455 | 1 | 377 | 0.7405 |
0.8315 |
| 4rk2-assembly1.cif.gz_A | 40 | 453 | 1 | 393 | 0.7384 |
0.8155 |
| 6wpn-assembly2.cif.gz_B | 43 | 457 | 1 | 394 | 0.7346 |
0.8116 |
| 7vfr-assembly1.cif.gz_A | 41 | 459 | 1 | 397 | 0.7346 |
0.809 |
| 7vfq-assembly2.cif.gz_B | 41 | 459 | 1 | 396 | 0.7345 |
0.8099 |
| 2z8d-assembly2.cif.gz_B | 36 | 459 | 1 | 399 | 0.7342 |
0.8071 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 39 | 453 | 26 | 422 | 0.7557 |
0.8521 |
| AF-Q9KEE7-F1-model_v4 | 12 | 455 | 24 | 445 | 0.7218 |
0.792 |
| AF-Q8FVS7-F1-model_v4 | 39 | 456 | 23 | 411 | 0.6966 |
0.7949 |
| AF-Q578M8-F1-model_v4 | 39 | 456 | 23 | 411 | 0.6957 |
0.7939 |
| AF-O07009-F1-model_v4 | 28 | 457 | 23 | 419 | 0.6941 |
0.7869 |
| AF-Q2YKZ9-F1-model_v4 | 39 | 456 | 23 | 411 | 0.6941 |
0.7923 |
| AF-O06989-F1-model_v4 | 13 | 457 | 20 | 416 | 0.6918 |
0.7786 |
| AF-Q00749-F1-model_v4 | 39 | 457 | 33 | 420 | 0.6906 |
0.7953 |
| AF-P9WGU9-F1-model_v4 | 40 | 456 | 31 | 465 | 0.6854 |
0.7761 |
| AF-P9WGU8-F1-model_v4 | 41 | 456 | 32 | 465 | 0.6853 |
0.7783 |