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Cluster: HRGMv2_4525_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4525_9 HRGMv2_4525_9_43 55955 57583 - GH13_31
pfam HRGMv2_4525_9 HRGMv2_4525_9_44 57596 58351 - Hydrolase | Hydrolase_like | HAD_2
CAZyme HRGMv2_4525_9 HRGMv2_4525_9_45 58373 60103 - CBM34 | GH13_20
CAZyme HRGMv2_4525_9 HRGMv2_4525_9_46 60100 61563 - GH77
CAZyme HRGMv2_4525_9 HRGMv2_4525_9_47 61574 63832 - GT35
CAZyme HRGMv2_4525_9 HRGMv2_4525_9_48 63845 65803 - GH133
CAZyme HRGMv2_4525_9 HRGMv2_4525_9_49 65817 67742 - GH13_14
TC HRGMv2_4525_9 HRGMv2_4525_9_50 67777 68643 - 3.A.1.1.27
TC HRGMv2_4525_9 HRGMv2_4525_9_51 68647 70026 - 3.A.1.1.27
Gene ID: HRGMv2_4525_9_43
Type: CAZyme
Location: 55955 - 57583 (-)
Gene ID: HRGMv2_4525_9_44
Type: pfam
Location: 57596 - 58351 (-)
Gene ID: HRGMv2_4525_9_45
Type: CAZyme
Location: 58373 - 60103 (-)
Gene ID: HRGMv2_4525_9_46
Type: CAZyme
Location: 60100 - 61563 (-)
Gene ID: HRGMv2_4525_9_47
Type: CAZyme
Location: 61574 - 63832 (-)
Gene ID: HRGMv2_4525_9_48
Type: CAZyme
Location: 63845 - 65803 (-)
Gene ID: HRGMv2_4525_9_49
Type: CAZyme
Location: 65817 - 67742 (-)
Gene ID: HRGMv2_4525_9_50
Type: TC
Location: 67777 - 68643 (-)
Gene ID: HRGMv2_4525_9_51
Type: TC
Location: 68647 - 70026 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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