Cluster: HRGMv2_4525_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4525
- CGC Family ID: CGCFAM_00070
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4525_19 | HRGMv2_4525_19_1 | 52 | 1071 | - | GT2 |
| CAZyme | HRGMv2_4525_19 | HRGMv2_4525_19_2 | 1182 | 2126 | - | GT2 |
| peptidase | HRGMv2_4525_19 | HRGMv2_4525_19_3 | 2363 | 3859 | + | S11.UPW |
| TC | HRGMv2_4525_19 | HRGMv2_4525_19_4 | 3902 | 5362 | + | 2.A.50.2.1 |
Gene ID: HRGMv2_4525_19_1
Type: CAZyme
Location: 52 - 1071 (-)
Type: CAZyme
Location: 52 - 1071 (-)
Gene ID: HRGMv2_4525_19_2
Type: CAZyme
Location: 1182 - 2126 (-)
Type: CAZyme
Location: 1182 - 2126 (-)
Gene ID: HRGMv2_4525_19_3
Type: peptidase
Location: 2363 - 3859 (+)
Type: peptidase
Location: 2363 - 3859 (+)
Gene ID: HRGMv2_4525_19_4
Type: TC
Location: 3902 - 5362 (+)
Type: TC
Location: 3902 - 5362 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerofilum
Species
Anaerofilum excrementigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.