Genome Details
Selected Rep_genome_ID: HRGMv2_3490
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG172_70 | 2,262,800 | 99.53% | 0.23% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_3490 | 2,481,386 | 100% | 0.077% | Ethiopia | Africa | HRGM |
| MGYG000003482 | 2,265,437 | 98.13% | 0.47% | Fiji | Oceania | UHGG |
| Rep_1903 | 2,223,663 | 93.604% | 0.0778816% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3490_CGC10 | CGCFAM_00012 | Yes | 4 | 1 | host glycan/beta-glucan |
| HRGMv2_3490_CGC23 | CGCFAM_01182 | Yes | 6 | 1 | |
| HRGMv2_3490_CGC13 | CGCFAM_01457 | Yes | 4 | 1 | |
| HRGMv2_3490_CGC26 | CGCFAM_02047 | Yes | 5 | 1 | |
| HRGMv2_3490_CGC24 | CGCFAM_02075 | Yes | 7 | 1 | |
| HRGMv2_3490_CGC27 | CGCFAM_02599 | Yes | 3 | 1 | |
| HRGMv2_3490_CGC22 | CGCFAM_03110 | Yes | 7 | 2 | |
| HRGMv2_3490_CGC3 | CGCFAM_06224 | Yes | 7 | 1 | |
| HRGMv2_3490_CGC15 | CGCFAM_10374 | Yes | 4 | 1 | |
| HRGMv2_3490_CGC16 | CGCFAM_10375 | Yes | 6 | 1 | |
| HRGMv2_3490_CGC18 | CGCFAM_10376 | Yes | 10 | 1 | |
| HRGMv2_3490_CGC20 | CGCFAM_10377 | Yes | 6 | 1 | |
| HRGMv2_3490_CGC4 | CGCFAM_10378 | Yes | 5 | 1 | |
| HRGMv2_3490_CGC7 | CGCFAM_10379 | Yes | 9 | 1 |
Top CAZyme Families