Cluster: HRGMv2_3490_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3490
- CGC Family ID: CGCFAM_10374
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3490_9 | HRGMv2_3490_9_31 | 30788 | 32452 | - | 9.A.47.1.1 |
| pfam | HRGMv2_3490_9 | HRGMv2_3490_9_32 | 32458 | 33474 | - | SAF | RcpC |
| peptidase | HRGMv2_3490_9 | HRGMv2_3490_9_33 | 33943 | 34578 | + | A24.UPA |
| CAZyme | HRGMv2_3490_9 | HRGMv2_3490_9_34 | 34849 | 35562 | - | GT81 |
Gene ID: HRGMv2_3490_9_31
Type: TC
Location: 30788 - 32452 (-)
Type: TC
Location: 30788 - 32452 (-)
Gene ID: HRGMv2_3490_9_32
Type: pfam
Location: 32458 - 33474 (-)
Type: pfam
Location: 32458 - 33474 (-)
Gene ID: HRGMv2_3490_9_33
Type: peptidase
Location: 33943 - 34578 (+)
Type: peptidase
Location: 33943 - 34578 (+)
Gene ID: HRGMv2_3490_9_34
Type: CAZyme
Location: 34849 - 35562 (-)
Type: CAZyme
Location: 34849 - 35562 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.