Cluster: HRGMv2_3490_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3490
- CGC Family ID: CGCFAM_01457
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3490_6 | HRGMv2_3490_6_12 | 11281 | 13764 | + | 3.A.7.4.2 |
| NULL(UNKNOWN) | HRGMv2_3490_6 | HRGMv2_3490_6_13 | 13761 | 13889 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3490_6 | HRGMv2_3490_6_14 | 13893 | 16325 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3490_6 | HRGMv2_3490_6_15 | 16350 | 16916 | + | GH23 |
Gene ID: HRGMv2_3490_6_12
Type: TC
Location: 11281 - 13764 (+)
Type: TC
Location: 11281 - 13764 (+)
Gene ID: HRGMv2_3490_6_13
Type:
Location: 13761 - 13889 (+)
Type:
Location: 13761 - 13889 (+)
Gene ID: HRGMv2_3490_6_14
Type:
Location: 13893 - 16325 (+)
Type:
Location: 13893 - 16325 (+)
Gene ID: HRGMv2_3490_6_15
Type: CAZyme
Location: 16350 - 16916 (+)
Type: CAZyme
Location: 16350 - 16916 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.