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Cluster: HRGMv2_3490_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3490_1 HRGMv2_3490_1_140 151292 152122 - CE11
STP HRGMv2_3490_1 HRGMv2_3490_1_141 152428 153081 - ACT | CBS | CBS
TC HRGMv2_3490_1 HRGMv2_3490_1_142 153193 153909 - 3.A.1.4.10
TC HRGMv2_3490_1 HRGMv2_3490_1_143 153915 154685 - 3.A.1.4.10
TC HRGMv2_3490_1 HRGMv2_3490_1_144 154678 155634 - 3.A.1.4.10
TC HRGMv2_3490_1 HRGMv2_3490_1_145 155647 156534 - 3.A.1.4.10
TC HRGMv2_3490_1 HRGMv2_3490_1_146 156766 157938 - 3.A.1.4.10
Gene ID: HRGMv2_3490_1_140
Type: CAZyme
Location: 151292 - 152122 (-)
Gene ID: HRGMv2_3490_1_141
Type: STP
Location: 152428 - 153081 (-)
Gene ID: HRGMv2_3490_1_142
Type: TC
Location: 153193 - 153909 (-)
Gene ID: HRGMv2_3490_1_143
Type: TC
Location: 153915 - 154685 (-)
Gene ID: HRGMv2_3490_1_144
Type: TC
Location: 154678 - 155634 (-)
Gene ID: HRGMv2_3490_1_145
Type: TC
Location: 155647 - 156534 (-)
Gene ID: HRGMv2_3490_1_146
Type: TC
Location: 156766 - 157938 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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