Cluster: HRGMv2_3490_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3490
- CGC Family ID: CGCFAM_03110
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3490_15 | HRGMv2_3490_15_1 | 254 | 1039 | - | 3.A.1.3.27 |
| pfam | HRGMv2_3490_15 | HRGMv2_3490_15_2 | 1227 | 1517 | - | zf_Tbcl | zf_Tbcl_2 |
| CAZyme | HRGMv2_3490_15 | HRGMv2_3490_15_3 | 1876 | 3663 | - | GT41 |
| CAZyme | HRGMv2_3490_15 | HRGMv2_3490_15_4 | 3686 | 4393 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_3490_15 | HRGMv2_3490_15_5 | 4390 | 5325 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3490_15 | HRGMv2_3490_15_6 | 5375 | 6154 | - | 3.A.1.3.24 |
| TC | HRGMv2_3490_15 | HRGMv2_3490_15_7 | 6135 | 6779 | - | 3.A.1.3.15 |
Gene ID: HRGMv2_3490_15_1
Type: TC
Location: 254 - 1039 (-)
Type: TC
Location: 254 - 1039 (-)
Gene ID: HRGMv2_3490_15_2
Type: pfam
Location: 1227 - 1517 (-)
Type: pfam
Location: 1227 - 1517 (-)
Gene ID: HRGMv2_3490_15_3
Type: CAZyme
Location: 1876 - 3663 (-)
Type: CAZyme
Location: 1876 - 3663 (-)
Gene ID: HRGMv2_3490_15_4
Type: CAZyme
Location: 3686 - 4393 (-)
Type: CAZyme
Location: 3686 - 4393 (-)
Gene ID: HRGMv2_3490_15_5
Type:
Location: 4390 - 5325 (-)
Type:
Location: 4390 - 5325 (-)
Gene ID: HRGMv2_3490_15_6
Type: TC
Location: 5375 - 6154 (-)
Type: TC
Location: 5375 - 6154 (-)
Gene ID: HRGMv2_3490_15_7
Type: TC
Location: 6135 - 6779 (-)
Type: TC
Location: 6135 - 6779 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.