PROTEIN: HRGMv2_3490_15_5
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Protein File & Metadata
Source:
HRGMv2_3490_15_5.pdb
Genome ID:
Protein ID:
HRGMv2_3490_15_5
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Protein Sequence
MAEKIKAELL SFLKGSELPL SILVVESVGY LPALRRLFPR AALYAVTANG QPEGPEYAGL 60 SVHWTALDYL AAPLPFAPET FDYIISDLLL EQAGNPQDIA AGFSRYIKQT GALLTSFRNI 120 RHWSVLEELR DGHYYRVCAR LFAKPEFEKL LYASYYKAVR MRAQRRAAPP EVMARLQAAA 180 FENTHDDLET EFWLVYAARS MPELSLLKSF YTQAQRETLS RLLHRIEYGV DTARQVAAFW 240 AFYDAAGLFP AYAANFVRES VFHSRRFYRH LRAFSTGRGE VREMLSEACA SARSEEERAM 300 LAALLREEDA I 311
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8FD48-F1-model_v4 | 10 | 201 | 1 | 197 | 0.6479 |
0.8378 |
| AF-K0F098-F1-model_v4 | 1 | 205 | 1 | 183 | 0.6347 |
0.8136 |
| AF-Q2FYG5-F1-model_v4 | 10 | 248 | 1 | 200 | 0.6145 |
0.7614 |
| AF-Q9I6A6-F1-model_v4 | 4 | 209 | 2 | 204 | 0.6129 |
0.7625 |
| AF-A0A0D2GFJ3-F1-model_v4 | 1 | 205 | 1 | 229 | 0.5885 |
0.7651 |
| AF-X8FFK3-F1-model_v4 | 1 | 208 | 5 | 188 | 0.581 |
0.7531 |
| AF-Q5F900-F1-model_v4 | 1 | 260 | 4 | 214 | 0.5791 |
0.7214 |
| AF-P96246-F1-model_v4 | 1 | 216 | 7 | 191 | 0.5768 |
0.7507 |
| AF-X8FGS1-F1-model_v4 | 1 | 208 | 23 | 226 | 0.5722 |
0.743 |
| AF-K0ENI0-F1-model_v4 | 1 | 200 | 25 | 214 | 0.5721 |
0.7706 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UNL94672.1 | GT2 | 1 | 311 | 242 | 576 | 0.5601 |
0.738 |
| AF-M1LYC8-F1-model_v4 | GT2 | 1 | 311 | 333 | 649 | 0.5451 |
0.7572 |
| A0A090ZBG0 | GT2 | 1 | 311 | 248 | 579 | 0.5413 |
0.7189 |
| AF-A0A7G1IGK9-F1-model_v4 | GT2 | 1 | 295 | 16 | 323 | 0.5269 |
0.5893 |
| AF-A0A160T3B3-F1-model_v4 | GT2 | 1 | 205 | 7 | 268 | 0.5158 |
0.7227 |
| AF-A0A1D7XL13-F1-model_v4 | GT2 | 1 | 288 | 266 | 547 | 0.5125 |
0.7299 |
| AOZ93247.1 | GT2 | 1 | 311 | 243 | 572 | 0.5087 |
0.6713 |
| AF-A0A3G3K172-F1-model_v4 | GT2 | 1 | 311 | 261 | 581 | 0.5051 |
0.7125 |
| UYO05189.1 | GT2 | 1 | 306 | 243 | 543 | 0.5003 |
0.6832 |
| AF-I9NNS4-F1-model_v4 | GT2 | 1 | 294 | 243 | 465 | 0.4927 |
0.8149 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UNL94672.1 | GT2 | 1 | 311 | 242 | 576 | 0.5601 |
0.738 |
| A0A090ZBG0 | GT2 | 1 | 311 | 248 | 579 | 0.5413 |
0.7189 |
| AHC23007.2 | GT2 | 1 | 200 | 50 | 301 | 0.5346 |
0.8095 |
| A0A160T3B3 | GT2 | 1 | 205 | 7 | 268 | 0.5158 |
0.7227 |
| AOZ93247.1 | GT2 | 1 | 311 | 243 | 572 | 0.5087 |
0.6713 |
| A0A3G3K172 | GT2 | 1 | 311 | 261 | 581 | 0.5051 |
0.7125 |
| UYO05189.1 | GT2 | 1 | 306 | 243 | 543 | 0.5003 |
0.6832 |
| G2SZM9 | GT2 | 1 | 259 | 231 | 447 | 0.4832 |
0.8058 |
| M1MCY2 | GT2 | 1 | 217 | 245 | 468 | 0.482 |
0.8222 |
| AQR96930.1 | GT2 | 1 | 311 | 333 | 649 | 0.482 |
0.669 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3cc8-assembly1.cif.gz_A-2 | 4 | 201 | 1 | 210 | 0.663 |
0.8528 |
| 8k5l-assembly2.cif.gz_C | 1 | 199 | 2 | 201 | 0.6056 |
0.7562 |
| 3l8d-assembly1.cif.gz_A-2 | 3 | 205 | 3 | 202 | 0.597 |
0.7456 |
| 6f5z-assembly1.cif.gz_A | 1 | 205 | 14 | 226 | 0.5888 |
0.7609 |
| 6f5z-assembly1.cif.gz_B | 1 | 260 | 9 | 227 | 0.587 |
0.7177 |
| 4obx-assembly1.cif.gz_B | 1 | 200 | 8 | 235 | 0.5771 |
0.7777 |
| 3bkw-assembly1.cif.gz_A | 3 | 199 | 4 | 219 | 0.577 |
0.7603 |
| 3g5l-assembly2.cif.gz_A | 1 | 201 | 1 | 222 | 0.5767 |
0.7524 |
| 3bkw-assembly1.cif.gz_B | 3 | 199 | 4 | 216 | 0.5763 |
0.755 |
| 4htf-assembly1.cif.gz_A | 1 | 205 | 13 | 244 | 0.5753 |
0.771 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P96576-F1-model_v4 | 1 | 208 | 3 | 181 | 0.5926 |
0.7712 |
| AF-B9DNV5-F1-model_v4 | 1 | 222 | 25 | 241 | 0.5827 |
0.7376 |
| AF-B1HTA6-F1-model_v4 | 1 | 208 | 23 | 234 | 0.5792 |
0.7512 |
| AF-P67061-F1-model_v4 | 1 | 219 | 25 | 241 | 0.5788 |
0.7327 |
| AF-A8Z450-F1-model_v4 | 1 | 248 | 25 | 241 | 0.5785 |
0.7326 |
| AF-A5ISZ9-F1-model_v4 | 1 | 219 | 25 | 241 | 0.5783 |
0.7321 |
| AF-Q5HFV2-F1-model_v4 | 1 | 248 | 25 | 241 | 0.5783 |
0.7322 |
| AF-P67062-F1-model_v4 | 1 | 246 | 25 | 241 | 0.5779 |
0.7319 |
| AF-Q72HI4-F1-model_v4 | 1 | 200 | 12 | 220 | 0.5767 |
0.7514 |
| AF-A6U1T9-F1-model_v4 | 1 | 253 | 25 | 241 | 0.5766 |
0.7296 |