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Cluster: HRGMv2_3490_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3490_13 HRGMv2_3490_13_27 38925 39512 + 2.A.76.1.4
NULL(UNKNOWN) HRGMv2_3490_13 HRGMv2_3490_13_28 39587 39694 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3490_13 HRGMv2_3490_13_29 39980 41689 - GH13_31
TC HRGMv2_3490_13 HRGMv2_3490_13_30 41894 43171 + 2.A.45.2.2
TC HRGMv2_3490_13 HRGMv2_3490_13_31 43611 44936 + 2.A.1.14.3
STP HRGMv2_3490_13 HRGMv2_3490_13_32 45355 45765 - Hemerythrin
TC HRGMv2_3490_13 HRGMv2_3490_13_33 45986 47788 + 1.B.52.2.1
NULL(UNKNOWN) HRGMv2_3490_13 HRGMv2_3490_13_34 47835 48188 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3490_13 HRGMv2_3490_13_35 48614 48805 + 2.A.64.3.1
TC HRGMv2_3490_13 HRGMv2_3490_13_36 48802 49662 + 2.A.64.3.1
Gene ID: HRGMv2_3490_13_27
Type: TC
Location: 38925 - 39512 (+)
Gene ID: HRGMv2_3490_13_28
Type:
Location: 39587 - 39694 (+)
Gene ID: HRGMv2_3490_13_29
Type: CAZyme
Location: 39980 - 41689 (-)
Gene ID: HRGMv2_3490_13_30
Type: TC
Location: 41894 - 43171 (+)
Gene ID: HRGMv2_3490_13_31
Type: TC
Location: 43611 - 44936 (+)
Gene ID: HRGMv2_3490_13_32
Type: STP
Location: 45355 - 45765 (-)
Gene ID: HRGMv2_3490_13_33
Type: TC
Location: 45986 - 47788 (+)
Gene ID: HRGMv2_3490_13_34
Type:
Location: 47835 - 48188 (+)
Gene ID: HRGMv2_3490_13_35
Type: TC
Location: 48614 - 48805 (+)
Gene ID: HRGMv2_3490_13_36
Type: TC
Location: 48802 - 49662 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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