Cluster: HRGMv2_3490_CGC27
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3490
- CGC Family ID: CGCFAM_02599
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3490_26 | HRGMv2_3490_26_2 | 1929 | 3257 | - | 3.A.18.1.1 |
| peptidase | HRGMv2_3490_26 | HRGMv2_3490_26_3 | 3254 | 4126 | - | M24.UPA |
| CAZyme | HRGMv2_3490_26 | HRGMv2_3490_26_4 | 4324 | 5169 | + | CE4 |
Gene ID: HRGMv2_3490_26_2
Type: TC
Location: 1929 - 3257 (-)
Type: TC
Location: 1929 - 3257 (-)
Gene ID: HRGMv2_3490_26_3
Type: peptidase
Location: 3254 - 4126 (-)
Type: peptidase
Location: 3254 - 4126 (-)
Gene ID: HRGMv2_3490_26_4
Type: CAZyme
Location: 4324 - 5169 (+)
Type: CAZyme
Location: 4324 - 5169 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.