Cluster: HRGMv2_3490_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_3490
- CGC Family ID: CGCFAM_00012
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3490_5 | HRGMv2_3490_5_45 | 48515 | 48823 | + | 4.A.3.2.2 |
| TC | HRGMv2_3490_5 | HRGMv2_3490_5_46 | 48877 | 50220 | + | 4.A.3.2.2 |
| TC | HRGMv2_3490_5 | HRGMv2_3490_5_47 | 50360 | 50683 | + | 4.A.3.2.2 |
| CAZyme | HRGMv2_3490_5 | HRGMv2_3490_5_48 | 50711 | 52108 | + | GH1 |
Gene ID: HRGMv2_3490_5_45
Type: TC
Location: 48515 - 48823 (+)
Type: TC
Location: 48515 - 48823 (+)
Gene ID: HRGMv2_3490_5_46
Type: TC
Location: 48877 - 50220 (+)
Type: TC
Location: 48877 - 50220 (+)
Gene ID: HRGMv2_3490_5_47
Type: TC
Location: 50360 - 50683 (+)
Type: TC
Location: 50360 - 50683 (+)
Gene ID: HRGMv2_3490_5_48
Type: CAZyme
Location: 50711 - 52108 (+)
Type: CAZyme
Location: 50711 - 52108 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.