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Cluster: HRGMv2_3490_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3490_2 HRGMv2_3490_2_115 112176 114743 + 3.A.3.5.15
TC HRGMv2_3490_2 HRGMv2_3490_2_116 114864 115697 + 3.A.1.3.27
TC HRGMv2_3490_2 HRGMv2_3490_2_117 116029 116694 + 3.A.1.3.17
TC HRGMv2_3490_2 HRGMv2_3490_2_118 116681 117400 + 3.A.1.3.24
TF HRGMv2_3490_2 HRGMv2_3490_2_119 117527 117727 + CSD
pfam HRGMv2_3490_2 HRGMv2_3490_2_120 117968 118522 + Ribosomal_S30AE | Ribosom_S30AE_C
CAZyme HRGMv2_3490_2 HRGMv2_3490_2_121 118789 120201 + AA4
pfam HRGMv2_3490_2 HRGMv2_3490_2_122 120203 121522 + CCG | CCG | Fer4_7 | Fer4_8 | Fer4_17
TC HRGMv2_3490_2 HRGMv2_3490_2_123 121800 124397 + 3.A.5.1.3
Gene ID: HRGMv2_3490_2_115
Type: TC
Location: 112176 - 114743 (+)
Gene ID: HRGMv2_3490_2_116
Type: TC
Location: 114864 - 115697 (+)
Gene ID: HRGMv2_3490_2_117
Type: TC
Location: 116029 - 116694 (+)
Gene ID: HRGMv2_3490_2_118
Type: TC
Location: 116681 - 117400 (+)
Gene ID: HRGMv2_3490_2_119
Type: TF
Location: 117527 - 117727 (+)
Gene ID: HRGMv2_3490_2_120
Type: pfam
Location: 117968 - 118522 (+)
Gene ID: HRGMv2_3490_2_121
Type: CAZyme
Location: 118789 - 120201 (+)
Gene ID: HRGMv2_3490_2_122
Type: pfam
Location: 120203 - 121522 (+)
Gene ID: HRGMv2_3490_2_123
Type: TC
Location: 121800 - 124397 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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