Cluster: HRGMv2_3490_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3490
- CGC Family ID: CGCFAM_10375
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3490_11 | HRGMv2_3490_11_53 | 57169 | 58428 | + | 2.A.103.1.3 |
| pfam | HRGMv2_3490_11 | HRGMv2_3490_11_54 | 58425 | 59579 | + | Metallophos |
| CAZyme | HRGMv2_3490_11 | HRGMv2_3490_11_55 | 59602 | 61164 | + | GT41 |
| NULL(UNKNOWN) | HRGMv2_3490_11 | HRGMv2_3490_11_56 | 61281 | 62135 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3490_11 | HRGMv2_3490_11_57 | 62198 | 62995 | - | 2.A.102.4.3 |
| TC | HRGMv2_3490_11 | HRGMv2_3490_11_58 | 63386 | 64810 | + | 2.A.114.1.4 |
Gene ID: HRGMv2_3490_11_53
Type: TC
Location: 57169 - 58428 (+)
Type: TC
Location: 57169 - 58428 (+)
Gene ID: HRGMv2_3490_11_54
Type: pfam
Location: 58425 - 59579 (+)
Type: pfam
Location: 58425 - 59579 (+)
Gene ID: HRGMv2_3490_11_55
Type: CAZyme
Location: 59602 - 61164 (+)
Type: CAZyme
Location: 59602 - 61164 (+)
Gene ID: HRGMv2_3490_11_56
Type:
Location: 61281 - 62135 (+)
Type:
Location: 61281 - 62135 (+)
Gene ID: HRGMv2_3490_11_57
Type: TC
Location: 62198 - 62995 (-)
Type: TC
Location: 62198 - 62995 (-)
Gene ID: HRGMv2_3490_11_58
Type: TC
Location: 63386 - 64810 (+)
Type: TC
Location: 63386 - 64810 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.