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PROTEIN: HRGMv2_3490_11_56

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_3490_11_56.pdb
Genome ID:
HRGMv2_3490
Protein ID:
HRGMv2_3490_11_56

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Detailed structural information will appear here after analysis...

Protein Sequence 
MMDGTQTAGA   VREEIDDLYF   VPHGPQPLRV   LAIEAHALLP   RLLARLPAAR   VTAVTRFDGL 60
GLPASLAGRV   SLVHADTRVQ   APPLPAGSYD   IILAPHVLTE   ALDPYDTLLA   LSRLLTDVGR 120
LAAAFLNVRC   CDVLAGLQAG   EFPFRAQRLY   AKAEVVRLLN   DALFKEITFA   PGAQAAAPRG 180
AAFRACGFDD   TSHDLTTRVW   LVRADRSTGA   VAALKSLYTQ   ETRAELARVL   HRIEYGVRAE 240
ENIERLQALC   TREGIFRDYL   EDFVREVVTH   PARLSGIIER   LRLA 284
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-X8FD48-F1-model_v4 18 267 1 199 0.6945 0.8378
AF-K0F098-F1-model_v4 8 215 1 183 0.6544 0.8128
AF-Q2FYG5-F1-model_v4 18 255 1 200 0.6343 0.7591
AF-O07253-F1-model_v4 1 207 1 208 0.6193 0.7322
AF-A0A0D2GFJ3-F1-model_v4 5 212 3 229 0.6187 0.7655
AF-X8FC28-F1-model_v4 22 211 1 170 0.6085 0.7761
AF-Q5F900-F1-model_v4 5 267 7 214 0.608 0.7411
AF-A0A132Z9K2-F1-model_v4 9 207 15 200 0.6073 0.7775
AF-A0A077ZDM5-F1-model_v4 5 267 1 218 0.6072 0.7014
AF-X8FFK3-F1-model_v4 5 220 3 188 0.6068 0.7541
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160SYL3-F1-model_v4 GH39 8 211 33 277 0.5567 0.7657
UNL94672.1 GT2 9 284 242 519 0.5542 0.7723
AF-A0A160T3B3-F1-model_v4 GT2 4 212 4 268 0.5527 0.7328
AF-M1LYC8-F1-model_v4 GT2 9 284 333 626 0.5332 0.7815
AF-A0A7G1IGK9-F1-model_v4 GT2 7 284 15 314 0.533 0.6022
AF-A0A1D7XL13-F1-model_v4 GT2 9 284 266 549 0.5311 0.7333
A0A090ZBG0 GT2 9 284 250 524 0.5288 0.7443
AF-A9GSD8-F1-model_v4 GT2 7 280 35 436 0.5148 0.6891
A0A6N2DEP7 GT0 9 273 6 299 0.5142 0.7363
AF-I9NNS4-F1-model_v4 GT2 3 267 223 463 0.5142 0.7517
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160SYL3 GH39 8 211 33 277 0.5567 0.7657
AHC23007.2 GT2 5 206 48 301 0.5553 0.798
UNL94672.1 GT2 9 284 242 519 0.5542 0.7723
A0A160T3B3 GT2 4 212 4 268 0.5527 0.7328
A0A090ZBG0 GT2 9 284 250 524 0.5288 0.7443
AOZ93247.1 GT2 9 280 244 542 0.5137 0.7258
G2SZM9 GT2 3 267 214 447 0.5135 0.7577
A0A1W1VYU2 GT2 7 269 221 440 0.5063 0.7895
M1MCY2 GT2 9 227 248 469 0.5049 0.8123
B8NN22 GH43_6 7 215 62 324 0.5035 0.7265
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3cc8-assembly1.cif.gz_A-2 12 208 1 210 0.6906 0.8611
3l8d-assembly1.cif.gz_A-2 9 211 3 202 0.6283 0.7567
8k5l-assembly2.cif.gz_C 6 206 1 201 0.6235 0.7451
2p7h-assembly1.cif.gz_A 9 208 2 227 0.6151 0.7877
3dh0-assembly1.cif.gz_A 7 207 9 188 0.6126 0.7828
4obx-assembly1.cif.gz_B 5 207 11 235 0.6121 0.784
4htf-assembly1.cif.gz_A 9 212 13 244 0.6108 0.7934
6f5z-assembly1.cif.gz_A 7 215 14 226 0.6081 0.7441
3g5l-assembly1.cif.gz_B 11 211 1 213 0.6064 0.7482
6f5z-assembly1.cif.gz_B 8 269 15 228 0.6064 0.7288
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P96576-F1-model_v4 5 215 3 181 0.6282 0.7904
AF-O05400-F1-model_v4 3 206 11 180 0.6227 0.819
AF-Q55423-F1-model_v4 5 224 15 212 0.6129 0.7639
AF-B9DNV5-F1-model_v4 5 249 27 241 0.6085 0.7486
AF-Q9KCC4-F1-model_v4 5 229 25 245 0.6077 0.7354
AF-Q5HP74-F1-model_v4 5 268 27 241 0.6061 0.7456
AF-Q88SI6-F1-model_v4 5 215 25 237 0.6059 0.7521
AF-A8Z450-F1-model_v4 5 255 27 241 0.6053 0.7447
AF-Q8CSH9-F1-model_v4 5 268 27 241 0.6052 0.7445
AF-A7X2H6-F1-model_v4 5 255 27 241 0.6052 0.7443
Download Full SwissProt Results