Cluster: HRGMv2_3490_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3490
- CGC Family ID: CGCFAM_02047
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3490_21 | HRGMv2_3490_21_31 | 35809 | 36033 | + | 8.A.59.4.2 |
| CAZyme | HRGMv2_3490_21 | HRGMv2_3490_21_32 | 36272 | 37348 | - | GH170 |
| TC | HRGMv2_3490_21 | HRGMv2_3490_21_33 | 37526 | 38926 | - | 4.A.1.2.1 |
| STP | HRGMv2_3490_21 | HRGMv2_3490_21_34 | 38923 | 39837 | - | SIS |
| TC | HRGMv2_3490_21 | HRGMv2_3490_21_35 | 40094 | 41626 | - | 2.A.14.1.2 |
Gene ID: HRGMv2_3490_21_31
Type: TC
Location: 35809 - 36033 (+)
Type: TC
Location: 35809 - 36033 (+)
Gene ID: HRGMv2_3490_21_32
Type: CAZyme
Location: 36272 - 37348 (-)
Type: CAZyme
Location: 36272 - 37348 (-)
Gene ID: HRGMv2_3490_21_33
Type: TC
Location: 37526 - 38926 (-)
Type: TC
Location: 37526 - 38926 (-)
Gene ID: HRGMv2_3490_21_34
Type: STP
Location: 38923 - 39837 (-)
Type: STP
Location: 38923 - 39837 (-)
Gene ID: HRGMv2_3490_21_35
Type: TC
Location: 40094 - 41626 (-)
Type: TC
Location: 40094 - 41626 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_C
Species
Selenomonas_C sp934202005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.