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Genome Details

Selected Rep_genome_ID: HRGMv2_2727
Total Genomes Found: 9
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Faecalibacterium
→
Species
Faecalibacterium prausnitzii_E
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A46.bin_3 2,913,126 99.89% 0.34% China(Inner Mongolia) Asia IMGG
AG396_maxbin.011 2,634,081 98.64% 0% NA Africa H3AfricaPhase2
CGMR007643 2,304,789 99.32% 0% China Asia CGMR
GCA_021636605.1_ASM2163660v1_genomic 2,696,615 96.58% 1.36% NA Africa H3AfricaPhase1
HRGMv2_2727 3,022,188 100% 0% NA NA HRGM
Rep_3071 2,663,940 95.9184% 0% NA NA WIS
SPMP20_bin.68 2,371,178 96.37% 0% Singapore Asia SPMP
SPMP25_bin.15 2,185,209 95.92% 1.24% Singapore Asia SPMP
SPMP49_bin.32 2,762,000 97.96% 0% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2727_CGC6 CGCFAM_00008 Yes 8 3
HRGMv2_2727_CGC25 CGCFAM_00047 Yes 7 1
HRGMv2_2727_CGC3 CGCFAM_00063 Yes 14 4
HRGMv2_2727_CGC13 CGCFAM_00092 Yes 7 2
HRGMv2_2727_CGC27 CGCFAM_00159 Yes 6 1
HRGMv2_2727_CGC19 CGCFAM_00226 Yes 16 8 beta-mannan
PUL0658_HRGMv2_2727_C0 CGCFAM_00226 Yes 12 4 beta-mannan
HRGMv2_2727_CGC9 CGCFAM_00507 Yes 4 2
HRGMv2_2727_CGC1 CGCFAM_00586 Yes 10 4
HRGMv2_2727_CGC11 CGCFAM_00662 Yes 6 2
HRGMv2_2727_CGC21 CGCFAM_01321 Yes 8 1
HRGMv2_2727_CGC5 CGCFAM_03134 Yes 15 3
HRGMv2_2727_CGC7 CGCFAM_04449 Yes 6 2
HRGMv2_2727_CGC8 CGCFAM_06156 Yes 4 1
HRGMv2_2727_CGC29 CGCFAM_06162 Yes 3 1
HRGMv2_2727_CGC20 CGCFAM_10056 Yes 3 1
HRGMv2_2727_CGC23 CGCFAM_10161 Yes 4 1
Top CAZyme Families