dbCAN Logo

Cluster: HRGMv2_2727_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2727_3 HRGMv2_2727_3_47 47198 47899 - 1.A.14.2.2
pfam HRGMv2_2727_3 HRGMv2_2727_3_48 48000 49082 + Radical_SAM | HemN_C
TC HRGMv2_2727_3 HRGMv2_2727_3_49 49077 49652 - 3.A.1.17.3
pfam HRGMv2_2727_3 HRGMv2_2727_3_50 49654 50421 - BPD_transp_1
TC HRGMv2_2727_3 HRGMv2_2727_3_51 50588 51847 + 2.A.26.1.9
pfam HRGMv2_2727_3 HRGMv2_2727_3_52 51893 52924 - VitK2_biosynth | NMT1 | Phosphonate-bd | NMT1_2
TF HRGMv2_2727_3 HRGMv2_2727_3_53 53100 53780 + 0037767
CAZyme HRGMv2_2727_3 HRGMv2_2727_3_54 53824 54801 + GT2
Gene ID: HRGMv2_2727_3_47
Type: TC
Location: 47198 - 47899 (-)
Gene ID: HRGMv2_2727_3_48
Type: pfam
Location: 48000 - 49082 (+)
Gene ID: HRGMv2_2727_3_49
Type: TC
Location: 49077 - 49652 (-)
Gene ID: HRGMv2_2727_3_50
Type: pfam
Location: 49654 - 50421 (-)
Gene ID: HRGMv2_2727_3_51
Type: TC
Location: 50588 - 51847 (+)
Gene ID: HRGMv2_2727_3_52
Type: pfam
Location: 51893 - 52924 (-)
Gene ID: HRGMv2_2727_3_53
Type: TF
Location: 53100 - 53780 (+)
Gene ID: HRGMv2_2727_3_54
Type: CAZyme
Location: 53824 - 54801 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List