Cluster: HRGMv2_2727_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2727
- CGC Family ID: CGCFAM_10161
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2727_3 | HRGMv2_2727_3_156 | 162260 | 163774 | - | GH79 |
| pfam | HRGMv2_2727_3 | HRGMv2_2727_3_157 | 164098 | 165642 | + | Alk_phosphatase | Alk_phosphatase | TAT_signal |
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_158 | 165735 | 167078 | - | 2.A.23.1.5 |
| TC | HRGMv2_2727_3 | HRGMv2_2727_3_159 | 167263 | 167778 | - | 4.A.1.1.1 |
Gene ID: HRGMv2_2727_3_156
Type: CAZyme
Location: 162260 - 163774 (-)
Type: CAZyme
Location: 162260 - 163774 (-)
Gene ID: HRGMv2_2727_3_157
Type: pfam
Location: 164098 - 165642 (+)
Type: pfam
Location: 164098 - 165642 (+)
Gene ID: HRGMv2_2727_3_158
Type: TC
Location: 165735 - 167078 (-)
Type: TC
Location: 165735 - 167078 (-)
Gene ID: HRGMv2_2727_3_159
Type: TC
Location: 167263 - 167778 (-)
Type: TC
Location: 167263 - 167778 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.